Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1597 ATGGAGTGGGTGGCGAACCGTTGGACCGGCGTGGCGGCGGCGATATGGATCCAGTGGAGCTGCGGTGCATCCTACACCTTCAGCATCTACTCTCACGTCCTCAAGTCCTCCCAGGGCTACGACCAATCCACCCTCGACACCGTTTCCGTCTTCAAAGACATCGGCGCCAACTTCGGCGTCCTCGCCGGCCTCCTCTACTCCGCCGTCACACCATACTCCGACTGTCACCGTGATTCCAAGTCCAGATGGAGCTCCTTTGCCGGACCCTGGGTTGTGGTCGCCGCCGGAGCTGTCCAGTGCTGTGCTGGTTTCTTATTCATCTGGGCTTCCGTCGTCGGGCTCATCGACCCGCCGCCGGTGCCCGTCATGTGCTTCTTCACCTGGCTCGCAGCTAATGGCCAGTGTTTCTTGAATACCACCAGCGTCGTCACCGGGTTGCGCAATTTCCCTCAATTTAGTGGCACCATCATCGGTATCATGAAGGGCTTTCTTGGGCTCAGTGGAGCTATCCTGATTCAGCTGTATCACACATTTTGTGATGGGGATCCCACCACCTACATTTTGTTGCTTGCTTGCCTACCTGCGTTCGTCTCAGTGCTGCTGATGTTTCTGTTGAGGATCTATGAAGCTCACGTGGGTGATTACAAGAAGCATTTGGACAGCTTCTCCTTGGTCACTGTGATTATTGTTGCCTATCTCATGTTCATGATCATCTTGCAGAACTTCGTGACATTACCATATTCCACGCGGATGTTCATGTTTGTGTTACTTGTTGTTCTACTAGCCTCACCTTTCGGCATCGCTGTCAAAGCCCAGTGGGAGGAGTCACAGGAATTCGAGGCTTCAACGGAGTATCAACAACTGCCTAGTGTTGATCAGGGGGAAGTACCGGTGAATTTGGATGATGCCATGCCATTTGAAGAAGAAAAGAATCTCTTGCAAGCAATGTGCACAGTTGAGTTCTGGATGTTGTTTGCAACCATGATATCTGGGTTAGGTTCTGGGCTTGCAGCTATAAATAATATGAGCCAAATTGGAGAATCTCTTGGATATAGTACTATTGAGATTAATAATTTGGTGTCACTTTGGAGCATGTGGAATTTCCTTGGCAGATTTGGAGGTGGACATGTATCAGATTATATCATGCACAAAAGAGGTTGGCCTAGGCCTCTATTGATGGTTGTAACTCTAGGGGTGATGATAATTGGCCATTTAGTTATAGGTTCTGGTTTCCGTGGGAATTTGTATTTGGGTCCTGTTCTTATTGGCATCAGCTATGGTGCACATTGGTCCTTAATGCCTACAATCACTTCTGAGATTTTTGGTGTGAAGCACATGGGTACCATTTTCAACACTATTGCTGCAGCAAGCCCAATTGGATCTTATATACTTTCTGTGAGAGTTGTTGGATATATTTATGACAAGGAAACCATTGAAGAAGATAACTCATGCTTTGGCATCCACTGTTTCATGTTGTCCTTTTTTATTCTGGCTGGTGTGGCTTTTCTCTCATTTTTGGCTGGTCTGGCATTGTACTTCCGGACCCAAAAGTTTTATAAGCTAGTTGTTCTTAGAAGATTAAAACATTATGCACATTGA 1599 0.474 MEWVANRWTGVAAAIWIQWSCGASYTFSIYSHVLKSSQGYDQSTLDTVSVFKDIGANFGVLAGLLYSAVTPYSDCHRDSKSRWSSFAGPWVVVAAGAVQCCAGFLFIWASVVGLIDPPPVPVMCFFTWLAANGQCFLNTTSVVTGLRNFPQFSGTIIGIMKGFLGLSGAILIQLYHTFCDGDPTTYILLLACLPAFVSVLLMFLLRIYEAHVGDYKKHLDSFSLVTVIIVAYLMFMIILQNFVTLPYSTRMFMFVLLVVLLASPFGIAVKAQWEESQEFEASTEYQQLPSVDQGEVPVNLDDAMPFEEEKNLLQAMCTVEFWMLFATMISGLGSGLAAINNMSQIGESLGYSTIEINNLVSLWSMWNFLGRFGGGHVSDYIMHKRGWPRPLLMVVTLGVMIIGHLVIGSGFRGNLYLGPVLIGISYGAHWSLMPTITSEIFGVKHMGTIFNTIAAASPIGSYILSVRVVGYIYDKETIEEDNSCFGIHCFMLSFFILAGVAFLSFLAGLALYFRTQKFYKLVVLRRLKHYAH* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1597 532 PANTHER F25A4.25 PROTEIN 3 530 - -
Lja6g1597 532 SUPERFAMILY MFS general substrate transporter 230 517 IPR036259 -
Lja6g1597 532 CDD MFS_Mch1p_like 7 503 - -
Lja6g1597 532 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 530 - -
Lja6g1597 532 ProSiteProfiles Major facilitator superfamily (MFS) profile. 319 532 IPR020846 GO:0022857
Lja6g1597 532 SUPERFAMILY MFS general substrate transporter 5 207 IPR036259 -
Lja6g1597 532 Gene3D MFS general substrate transporter like domains 319 526 IPR036259 -
Lja6g1597 532 Pfam Major Facilitator Superfamily 324 517 IPR011701 GO:0022857|GO:0055085
Lja6g1597 532 Pfam Nodulin-like 7 69 IPR010658 -
Lja6g1597 532 Pfam Nodulin-like 87 268 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1597 Lja-Chr6 42755367 42757831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1597 1 529 Nodulin-like Gene Family AT1G74780 56.636 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1597 - - gmx:100799596 862.833