Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1591 ATGGCCAAGCACAGTTCCACGATTGTTTATGCTTTGTGGGTCTCCTTCATTCTTGCTTGTGTATTTTCCCTCTCATGTGAAGCTCATGATGAAAATCAAAAGCTTCACATTGTGTATATGGGTTCACTTCCTAAGACACCATCATATTCTCCAACCTCTCACCATCTTAGCATGCTGCAAAGAGTCTTTGATAGTAGTGATCCAACAAAATTCTTGGTACATAGTTACAAAAGAACCTTCAATGGTTTTGCTGCATTGCTAACGGACCAACAAAGGGACAAGCTAACAAAAATGGAAGGTGTTATCTCAGTTTTCCCAAGCAAAACTCTTCAAAAACACACCACAAGATCTTGGGACTTCATGGGTTTTCCTCAATCAGTCAAAAGAAACCCAACTACTGAGAGTGACATTGTGATTGGAGTTATTGACACTGGCATTTGGCTAGAATCAGAGAGTTTCAATGATCTTGGTTTTGGTCCCATTCCCCCAAAATGGAAAGGTACTTGTGCAGGTGGCAAGAACTTCACTTGCAACAAGAAGATCATTGGAGCAAGGTACTATGAGAGTGAGTCTGCTATAGACACTGATGGACATGGAAGCCACACAGCATCAACAGCAGCAGGGAACCAAGTCAAAGATGCGAGTTTTTATGGACTTGCACAAGGAATTGCAAGAGGAGGGGTTCCATCAGCAAGAGTTGCTGCATATAAAGCATGTTCTGTAAAATGCTCTGAAGCTAGTGTGCTAGCTGCTTTTGATGATGCCATAGCTGATGGAGTTGACATCATTTCAATTTCATTAGGACCTCATACTGCATCCAAATTTGAGGAAGATGCTGTTTCAATTGGTGGATTTCATGCCATGGGAAAAGGGATTCTCACAGTGCACTCTGCAGGAAACGATGGTCCTTGGCCAAGCTCAACTTCAAGTGTAGCACCATGGGTGCTAAGTGTCGCAGCGAGCACCATTGACCGTGATTTCATTGCGAAGCTCGTGCTTGGGAATGGGAAAACATTCACTGGGAAATCATTCAACACTTTCTCAACAAATAAAGTTCCCATTGCGGGACTTTTTTCTAACTCAGTTGAGTCTGTAAAAGGATATTTAGCTTTGTCTGGCGATATTGATAGTGAAGATGAAGCATATTTTCAAGGGGCAATTGGTGTGATCAAGAAGAGACATACTGAACATGATATAGCAGTGGTTACTACAATACCTTCTGTGGCATTGAGTTCCAATGACTATGATTCTGTGGAATCCTACAAAAATACAACAACAGATCCAACAGGAGAAATGCTCAAGAGTGAGACAGTTAAAAATGATGTTGCCCCTTATGTAGCAATTTTTTCTTCGCGCGGGCCTAATATCAAAGTTCCTGAAATTTTGAAACCAGATATTACTGGCCCTGGTGTGGAAATCTTAGCTGCATATTCACCCTTGGATTCACCCTCAGGTAGGAATTTTGACAAAAGATCAGTGAAATATAACATAATATCTGGAACTTCAATGGCATGTCCACATGTTTCTGGAATCGCGGCGTATGTGAAAAATTTTCACTTGGATTGGTCACCCGCCGCAATCAAATCTGCGATCATGACTTCAGCAAAGCCCATGAATGGTTCTAATTCTAGTGATTCAATTGGCGAATATGCTTATGGATCAGGGCATGTGAACCCTGTGCAAGCTGTTGATCCTGGCCTTGTTTATGACATTCATAAGGAGGATTATGTACAATTGTTGTGCAATTTGGGATATGATAACAAAACAATCCAAATCATATCTGGTGAAAATTATACCCTTTGCTCTGAAGCTCCTGATAGATCTTCAGTGAGAAATCTTAATTATCCTGCACTTGTTGCTCAAGTTGAGCCTATGACATCTTTAAGTGTTGTCTTTAATAGAACAGTCACAAATGTTGGGTTAGCAACCTCAAATTACACAGCAAGTGTGTTGCCAAATCCAAGAATGAATGTGACGGTGGAACCAGAGATTTTGTCCTTCAAATCATTGAATGAGAACAAGTCTTTTGTTGTCAACATCAATGGTGGGAAAGTGACAAAGGGAGATGTGCTCATCTCATCATTGGTTTGGTCAGATGGCATCCATGATGTGCGGAGTCCAATAATTGTGAATGTTTCTAGTTAA 2145 0.4093 MAKHSSTIVYALWVSFILACVFSLSCEAHDENQKLHIVYMGSLPKTPSYSPTSHHLSMLQRVFDSSDPTKFLVHSYKRTFNGFAALLTDQQRDKLTKMEGVISVFPSKTLQKHTTRSWDFMGFPQSVKRNPTTESDIVIGVIDTGIWLESESFNDLGFGPIPPKWKGTCAGGKNFTCNKKIIGARYYESESAIDTDGHGSHTASTAAGNQVKDASFYGLAQGIARGGVPSARVAAYKACSVKCSEASVLAAFDDAIADGVDIISISLGPHTASKFEEDAVSIGGFHAMGKGILTVHSAGNDGPWPSSTSSVAPWVLSVAASTIDRDFIAKLVLGNGKTFTGKSFNTFSTNKVPIAGLFSNSVESVKGYLALSGDIDSEDEAYFQGAIGVIKKRHTEHDIAVVTTIPSVALSSNDYDSVESYKNTTTDPTGEMLKSETVKNDVAPYVAIFSSRGPNIKVPEILKPDITGPGVEILAAYSPLDSPSGRNFDKRSVKYNIISGTSMACPHVSGIAAYVKNFHLDWSPAAIKSAIMTSAKPMNGSNSSDSIGEYAYGSGHVNPVQAVDPGLVYDIHKEDYVQLLCNLGYDNKTIQIISGENYTLCSEAPDRSSVRNLNYPALVAQVEPMTSLSVVFNRTVTNVGLATSNYTASVLPNPRMNVTVEPEILSFKSLNENKSFVVNINGGKVTKGDVLISSLVWSDGIHDVRSPIIVNVSS* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1591 714 ProSitePatterns Serine proteases, subtilase family, serine active site. 500 510 IPR023828 -
Lja6g1591 714 Pfam Fibronectin type-III domain 612 710 IPR041469 -
Lja6g1591 714 Pfam Peptidase inhibitor I9 36 111 IPR010259 -
Lja6g1591 714 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Lja6g1591 714 Gene3D - 580 713 - -
Lja6g1591 714 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 35 712 - -
Lja6g1591 714 SUPERFAMILY Subtilisin-like 113 567 IPR036852 GO:0004252|GO:0006508
Lja6g1591 714 ProSiteProfiles Serine proteases, subtilase domain profile. 117 563 - -
Lja6g1591 714 CDD Peptidases_S8_3 110 535 IPR034197 -
Lja6g1591 714 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 113 IPR037045 -
Lja6g1591 714 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 712 IPR045051 -
Lja6g1591 714 Gene3D Peptidase S8/S53 domain 136 576 IPR036852 GO:0004252|GO:0006508
Lja6g1591 714 Gene3D - 324 439 - -
Lja6g1591 714 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Lja6g1591 714 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Lja6g1591 714 PRINTS Subtilisin serine protease family (S8) signature 499 515 IPR015500 -
Lja6g1591 714 Pfam Subtilase family 135 548 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1591 Lja-Chr6 42671771 42674238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1591 1 712 Subtilisin-like Serine Gene Family AT5G58830 50.899 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1591 - - tcc:18590796 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1591 6 42671771 42674238 Lja6g1591 6 42671771 42674238 ECH