Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1564 ATGAAACCTTTTCTTAATGTCTATCAAGTACTTTGGAGCCTCATCATACTGATCATGCTAGCTAGCTTTACACCCCTATTCAAATCCCTGAAACATAGTCACAACAAAAAACCAAGACTCCCTCCTGGTCCCACACCTTGGCCTATAGTTGGCAATCTTCCACAAATGCTAGCAAACAAGTCTGCATTCAGATACATACAACAAGTCATGAATGATCTCAACACTGAAATTGCATGCATCCGTTTGGGTAACATCCATGTCATCCCAGTGTCAAGTCCTGAAATTGCACGTGAGTTCTTGATAAAACAGGATTCTGTTTTTGCCTCAAGACCCTTGAACTGGTCCAGTGCGCATGTTTCACATGGATATCTAACCACAGCTCTTGTCCCCTTTGGAGAACAGTGGAAGAAAATGAAGAAAGTGATCACCAATGACTTGCTTTCACCCCTCAGGCATCAATGGCTTCATGACAAGAGGGTCCAAGAAGCTGATAACCTTGTCAGTTTTGTGTACAACCAATGCAGAAATGGTGGTGGACTAGTGAATGTGAGAGTTGCTGCACAACATTATTCTGGGAATGTGATAAGGAAGTTGGTTTTCAATAGAAGGTTCTTTGGAGAGGGTAGGGAAGATGGAGGACCTGGTGTTGAGGAAGTAGAGCATGTAGAAGCACTTTTCACTATGCTGAAGTACCTCTTTGCCTTCTCTATTTCTGATTACATGGCATGCTTCAGGGGACTTGACTTGGATGGTCATAAAGGGAACATAAAGAAGGCTTGTGAGGTTGTGAGAAAATATCATGATCCAATTATTGAAGACAGAATTGAGAAATGGAAGAATGAGAAAAATACAGATCAAGAAGGCTTGCTAGATGTTCTCATTTCACTCAAAGGAGCTCACAACAATCCACTTTTGACTGTGGAGGAAATTCGGTCTCAAATTATGGAAATAATGATCGCAACAGTTGATAATCCAACAAATGCACTTGAATGGGGACTTGCAGAATTGATAAATCAGACTAAGCTACTACGAAAGGCCACTGAGGAATTGGACAATGTGGTAGGTAGAGGAAGGCTAGTGCAAGAATCAGATTTCCCAAAGCTCAACTATGTGAAGGCTTGTGCAAGAGAAGCTTTTCGTCTTCACCCCATTACAGATTTTAACATTCCCCATGTTTCAATGGTTGACACAGTTGTTGCTAATTACTTGATCCCAAAGGGTAGCCATGTGTTGATAAGGAGACAAGGAATTGGCCACAATCCAAGAGTTTGGGAGGAACCACTCAAGTTCAAACCAGAACGTCATCTTGAGAGTGATGGGTCTAATTTGGTTTTAACAGAGCCAAGCTTGAAGTTGATAACATTCAGCACTGGAAGACGTGGTTGTCCAGGACTCATGCTTGGAACTTCAATGACTCTTATGCTATTTGCAAGGTTGCTTCATGGCTTCACTTGGAGTGTGCCACCTAATCAGTCTAGAATTGATCTCTCTGAATCTGATGGAGATACCACCAAAGCTAAGCCTCTTGTGGCCTTTGCAGAGCCAAGGTTATTGGCAGAGGCTTATCATGTATATTAA 1578 0.4202 MKPFLNVYQVLWSLIILIMLASFTPLFKSLKHSHNKKPRLPPGPTPWPIVGNLPQMLANKSAFRYIQQVMNDLNTEIACIRLGNIHVIPVSSPEIAREFLIKQDSVFASRPLNWSSAHVSHGYLTTALVPFGEQWKKMKKVITNDLLSPLRHQWLHDKRVQEADNLVSFVYNQCRNGGGLVNVRVAAQHYSGNVIRKLVFNRRFFGEGREDGGPGVEEVEHVEALFTMLKYLFAFSISDYMACFRGLDLDGHKGNIKKACEVVRKYHDPIIEDRIEKWKNEKNTDQEGLLDVLISLKGAHNNPLLTVEEIRSQIMEIMIATVDNPTNALEWGLAELINQTKLLRKATEELDNVVGRGRLVQESDFPKLNYVKACAREAFRLHPITDFNIPHVSMVDTVVANYLIPKGSHVLIRRQGIGHNPRVWEEPLKFKPERHLESDGSNLVLTEPSLKLITFSTGRRGCPGLMLGTSMTLMLFARLLHGFTWSVPPNQSRIDLSESDGDTTKAKPLVAFAEPRLLAEAYHVY* 526
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1564 525 Pfam Cytochrome P450 41 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1564 525 Gene3D Cytochrome P450 26 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1564 525 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 520 - -
Lja6g1564 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Lja6g1564 525 SUPERFAMILY Cytochrome P450 41 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1564 525 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1564 525 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1564 525 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1564 525 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1564 525 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1564 525 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1564 525 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1564 525 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 7 520 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja6g1564 Lja-Chr6 42185703 42188379 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1564 15 522 Cytochrome P450 AT4G39950 52.259 0.0 565
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1564 6 42185703 42188379 Lja6g1564 6 42185703 42188379 ECH