Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1548 ATGGGTGTAGAAAATGGAGAGTTCAGCGTGAGGGTAACTAATGAAGAAGTGGTGGCAGCATTGGTTCCAATGCAAGAACATTGGCTACCACTCTCTAACCTTGACCTTCTTCTACCTCCTGTCGATGTGGGAATTTTCTTCTGCTACAAGAAACCCACCTCCACGTCCACCACCTTTGCATCCATGGTGGTGTCTCTCAAGAAGGCCTTAGCTCAGGCTCTTGTTACCTACTATGCCTTTGCTGGTGAATTGGTTGTGAATTCCGCGGGTGAGCCTGAGCTTCTTTGCAATAACCGTGGGGTTGATTTTGCTCAAGCTGTGACCGACGTTGAGCTTGAGTTCCTCGATTTTTATAACCCGGATGACACCATTGAAGGAAAGTTTGTTCCCAAGAAGAAGCATGGCGTGCTTGCTGTCCAGGCAACTTCACTAAAGTGTGGTGGGATAATAGTGGCATGCACATTTGACCATCGCATAGCAGATGCTTACTCAGCAAACATGTTCCTCGTCTCATGGGCCGAGATGGCCCAGCCCACCAAATCCGGCAAGCCCACAATCATCAACGCCGCCACAAAACCATGTTTCCGCCGCTCCCTTCTCAGCCCTCGCCACCCACCAGGTTCCATCAACCCTTCCCTCCACCGCATGTACATCCCCATCTCCAAGCTCCCCCCTCCTCCTACCACCGCCTCCGCCCCTTTCCTCAGCCGCATATACTACGTCACGTCAGAACAGCTCCACTGCATGCAATCACAAGCAAGCACCAACACTAAGCACACAAAGCTTGAGTCCTTCTCAGCTTTCTTGTGGAAGATGGTTGCTTCCTCGGTTTCAAGCGGCAAAGGTTTCACCGCAAAAATGGGCATAGTCGTTGATGGAAGGAAGAGGCTCAATAACATGAGTTGCTATTTCGGAAACGTCCTTTCCATTCCGTTCGGCGTGAAACTCGCGGAGGAGCTGGCGGAGAAGGAGTTAGGGCAGGTGGCGGATGAGGTTCGTGACTTTGTGGCGGTCGCGGCGACAGAGGAGCACTTCTTGGGGCTCATTGATTGGGTGGAAGCGCATCGGCCGGTCCCTGGGGTGGCGAGGATTTATGGCGGCTGCACCGGAGAAGGACCGGCTTTTGTGGTGTCTTCCGGGCAGAGGTTCCCGCAGGAGAAAGTGGACTTTGGGTGGGGGAAGGCTGTGTTTGGTTCGTACCATTTTCCGTGGGGTGGTGAAGCTGGTTATGTGATGCCAATGGCGAGCCCTTTGGGGAATGGTGATTGGGTTGTGTACATGCACCTTTTGAAGGAGCAGTTGGAGTTCATAGAGTCTCATGTTGCTCATGTTTTCAAGCCTTTAACTTGGGATTACCTTAATCAATGA 1368 0.5212 MGVENGEFSVRVTNEEVVAALVPMQEHWLPLSNLDLLLPPVDVGIFFCYKKPTSTSTTFASMVVSLKKALAQALVTYYAFAGELVVNSAGEPELLCNNRGVDFAQAVTDVELEFLDFYNPDDTIEGKFVPKKKHGVLAVQATSLKCGGIIVACTFDHRIADAYSANMFLVSWAEMAQPTKSGKPTIINAATKPCFRRSLLSPRHPPGSINPSLHRMYIPISKLPPPPTTASAPFLSRIYYVTSEQLHCMQSQASTNTKHTKLESFSAFLWKMVASSVSSGKGFTAKMGIVVDGRKRLNNMSCYFGNVLSIPFGVKLAEELAEKELGQVADEVRDFVAVAATEEHFLGLIDWVEAHRPVPGVARIYGGCTGEGPAFVVSSGQRFPQEKVDFGWGKAVFGSYHFPWGGEAGYVMPMASPLGNGDWVVYMHLLKEQLEFIESHVAHVFKPLTWDYLNQ* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1548 455 Gene3D - 220 441 IPR023213 -
Lja6g1548 455 Gene3D - 8 217 IPR023213 -
Lja6g1548 455 Pfam Transferase family 9 442 - -
Lja6g1548 455 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 450 - -
Lja6g1548 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1548 Lja-Chr6 42038652 42041366 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1548 7 444 Monolignol Biosynthesis Gene Families AT5G48930 26.681 2.91e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1548 - - gmx:100785067 672.544