Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1545 ATGGTAGTGAAGGTATATGGCCCTGCCTATGCTTCCCCTAAACGGGTGATGGTGTGTCTGATTGAGAAGGAAATTGAGTTTGAAACAGTGCCTGTTGATATCTTCAAGAGAGAGCATAAGGATCCTGAATACCTCAAGATTCAGCCTTTTGGAGAGCTTCCAGTTATTCAAGATGGTGATTATACTCTATATGAATCTCGAGCAATAATCAGATACTATGCAGAGAAGTATAAAAACCAAGGGACAGAATTGCTGGGGAAGACAATAGAAGAAAGGGGTCTTGTGGAGCAATGGCTTGACGTGGAAGCACATAGCTTTCAACCACCAATCCACAACTTAGTTAATCATGTCCTGTTTGCCCCAATTTTGGGTACTCCCTCAGACCCAAAAGTGATTGAAGAGAGTGATGAAAAGCTTGTGAAGGTGCTTGATATATATGAGGAGAGATTGTCAAAGAGCAAGTACTTGGCTGGGGATTTCTTCAGCCTTGCTGATCTGAGCCATCTCTCATTTGGTCACTATTTGGTGAATCAAACTGGGAGAGGGAATTTCGTAAGGGAGAGGAAACATGTTAGTGCTTGGTGGGATGATATAAGCAGCAGACCTTCTTGGCAGAAGGTGCTTCAGCAATACAAGTACCCTGTTTAG 648 0.4306 MVVKVYGPAYASPKRVMVCLIEKEIEFETVPVDIFKREHKDPEYLKIQPFGELPVIQDGDYTLYESRAIIRYYAEKYKNQGTELLGKTIEERGLVEQWLDVEAHSFQPPIHNLVNHVLFAPILGTPSDPKVIEESDEKLVKVLDIYEERLSKSKYLAGDFFSLADLSHLSFGHYLVNQTGRGNFVRERKHVSAWWDDISSRPSWQKVLQQYKYPV* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1545 215 CDD GST_N_Phi 2 76 - -
Lja6g1545 215 Gene3D Glutaredoxin 1 85 - -
Lja6g1545 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 215 IPR010987 -
Lja6g1545 215 SUPERFAMILY Thioredoxin-like 3 81 IPR036249 -
Lja6g1545 215 Pfam Glutathione S-transferase, C-terminal domain 117 202 IPR004046 -
Lja6g1545 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Lja6g1545 215 SFLD Main (cytGST) 5 201 - -
Lja6g1545 215 CDD GST_C_Phi 90 208 IPR034347 -
Lja6g1545 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 215 - -
Lja6g1545 215 SUPERFAMILY GST C-terminal domain-like 81 212 IPR036282 -
Lja6g1545 215 Pfam Glutathione S-transferase, N-terminal domain 2 74 IPR004045 -
Lja6g1545 215 PANTHER GLUTATHIONE S-TRANSFERASE 2 215 - -
Lja6g1545 215 Gene3D - 86 208 - -
Lja6g1545 215 SFLD Glutathione Transferase (cytosolic) 5 201 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1545 Lja-Chr6 41985989 41987205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1545 1 215 Glutathione S-transferase Gene Family AT2G30870 60.000 7.00e-98 281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1545 6 41985989 41987205 Lja6g1545 6 41985989 41987205 ECH