Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1543 ATGTTTAATGAAGCTGTGAATGGATTTGCAGATGATGGCTGGTCCATGTTCGAGAGTGATGGCATTGATGATGTCACCCTTCTTGTGAATTCATCACCCAGCAAGATGATGGGTGCAAATCTTGGATATAACAATGGATTCCCATCCATGACCAGTTCTGTGCTATGTGCCAAAGCATCCATGTTGTTACAGAATGTCCCTCCAGCTATTCTTCTTAGATTCTTGCGGGAGCACCGATCAGAATGGGCAGATAGCAGTATTGATGCTTACTCAGCTGCTGCCATTAAAGCTGGCCCCTGTAGCTTGCCAGGGGCCAGAGGAAGTTTTGGGGGTCAGTTCATGGAGGTTATTAAGCTTGAAAACATGGGCTACTATCGGGACGACATGACTATGCCTGGTGATGTTTTCCTCTTGCAACTTTGCAGTGGAGTGGATGAGCATGCAGTTGGCACCAGTGCAGAACTTGTTTTTGCTCCAATAGATGCGTCTTTCTCTGATGATGCACCCATTTTACCTTCCGGTTTTCGTATTGTACCTCTTGATTCTGGCACGGATGCTGCTAGTCCAAACCGGACACTTGATCTTGCCTCATCACTTGAGGTTGGAACCACAGCAAACAAAGCTGCTGGTGCCAATTCAGGTCATTCTGGAAGCACAAAATCTGTGATGACAATAGCATTCCAGTTTGCATTTGAAGTCCACCTTCAAGATAATATAGCAACTATGGCCCGACAATATGTGCGTAGTATTGTTGCATCTGTTCAGAGGGTTTCCTTAGCACTTTCTCCTTCGCGCTTCGGTTCTCAAAGTGCTTTTCACTTACCACCTGGTACTCCTGAGGCTCAAACACTTGCTCGGTGGATCTGTAACAGCTATAGGTATGGCAGTTGA 891 0.4613 MFNEAVNGFADDGWSMFESDGIDDVTLLVNSSPSKMMGANLGYNNGFPSMTSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCSLPGARGSFGGQFMEVIKLENMGYYRDDMTMPGDVFLLQLCSGVDEHAVGTSAELVFAPIDASFSDDAPILPSGFRIVPLDSGTDAASPNRTLDLASSLEVGTTANKAAGANSGHSGSTKSVMTIAFQFAFEVHLQDNIATMARQYVRSIVASVQRVSLALSPSRFGSQSAFHLPPGTPEAQTLARWICNSYRYGS* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1543 296 PANTHER CLASS III HD-ZIP PROTEIN CNA1 2 293 - -
Lja6g1543 296 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 2 293 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1543 Lja-Chr6 41881048 41882782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1543 2 293 Homeobox Transcription Factor Family AT4G32880 69.381 1.08e-145 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1543 K09338 - gmx:100815727 539.265