Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1542 ATGGCGGTGAAGGTTTACGGCGCGTACTACCCTTCAGCTCAGAGGGTGCTGGTGTGTCTCGTTGAGAAGGAAATTCAGTTTGAGACACTCCCTCTTGATGCCTTGAAGCAAGAGCATCAGGATCCTCACTACCTCAAACTCCAGCCATTTGGAAAGATGCCTGTAATTCAAGATGGTGATTATACCCTCTATGAATCTCGTGCAATTATCAGATACTTGGCAGAAAAGTATAAGAACCAAGGGACAGAGTTGTTGGGGAGGACAATAGAAGAAAGGGGTCTGGTGGAGCAATGGCTTGAAGTGGAAGCACATCAGTTCCACCCACCAGTCTTGTACAACTATATCCATGATTATTATGGTGCTGCTCACCATCTGCGTCTTAATGACGACTCAGAAGTGGTTAAAGTGAATAATGAGAAGATTGCGAAGGTGCTGGATATATACGAGGAGAGGCTGTCAAGGAGCAAGTACTTGGCTGGTGATTTCTTCAGCCTTGCTGATCTGAGTCATCTCCCATTGGGTGCATTCTTGTGGTATCCAAATCCGCGGGACGAAGAACTGGTAGAGAAGAGAGAGCATGTGAGGGCTTGGTGGGAGGATATTAGCTCTAGGCCAGCTTGGAAAAAGGTGCAACAAGCATATCAATACCCTGTGTTTGGGGATCCAAATTTTTGGTAG 678 0.4646 MAVKVYGAYYPSAQRVLVCLVEKEIQFETLPLDALKQEHQDPHYLKLQPFGKMPVIQDGDYTLYESRAIIRYLAEKYKNQGTELLGRTIEERGLVEQWLEVEAHQFHPPVLYNYIHDYYGAAHHLRLNDDSEVVKVNNEKIAKVLDIYEERLSRSKYLAGDFFSLADLSHLPLGAFLWYPNPRDEELVEKREHVRAWWEDISSRPAWKKVQQAYQYPVFGDPNFW* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1542 225 CDD GST_N_Phi 2 76 - -
Lja6g1542 225 SFLD Glutathione Transferase (cytosolic) 4 204 IPR040079 -
Lja6g1542 225 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
Lja6g1542 225 SFLD Main (cytGST) 4 204 - -
Lja6g1542 225 PANTHER GLUTATHIONE S-TRANSFERASE 2 218 - -
Lja6g1542 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Lja6g1542 225 Gene3D - 86 210 - -
Lja6g1542 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 224 IPR010987 -
Lja6g1542 225 CDD GST_C_Phi 90 210 IPR034347 -
Lja6g1542 225 Gene3D Glutaredoxin 1 85 - -
Lja6g1542 225 SUPERFAMILY GST C-terminal domain-like 72 215 IPR036282 -
Lja6g1542 225 SUPERFAMILY Thioredoxin-like 3 81 IPR036249 -
Lja6g1542 225 Pfam Glutathione S-transferase, C-terminal domain 123 205 IPR004046 -
Lja6g1542 225 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1542 Lja-Chr6 41851424 41852946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1542 1 218 Glutathione S-transferase Gene Family AT2G30870 50.917 2.05e-77 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1542 K00799 - gmx:547589 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1542 6 41851424 41852946 Lja6g1542 6 41851424 41852946 ECH