Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1541 ATGGTGGTGAAGGTGTATGGTCCCACCTATGCTGCTCCAAAAGGGGTGGTTATGTGTCTGATTGAGAAAGAAATTGAGTTTGAATCAGTGCCCGTTGACCTCTCCAAAGGGGAAAACAAGACACCTGAGTTCCTCAAGATTCAGCCTTTTGGAAAGATTCCTGTAATTCAAGATGGTGATTATACACTCTATGAATCTAGAGCAATAAATAGATACTTGGCAGAGAAGTATAAAAACCAAGGGACAGAGTTGTTGGGGAAGACAATAGAAGAAAGGGGTCTTGTGGAGCAATGGCTTGAAGTAGAAGCACAAAACTTTCATCCACCACTCCACAAGCTAGTTCTCCATGTTCTGTTTGCTCCAATAAGGGGTTTTCCATCAGACCCAAAAGTGATTGAAGAGAGTGAGGTAAAGCTTTTGAAGGTGCTTGATATATATGAGGAGAGATTGTCAAAGAGCAAGTACTTGGCTGGAGATTTCTTCAGCCTTGCTGATCTGAGTCATCTTCCATTTGGTTATTATTTGGTGAACCAAACTGGGAGAGAGAATTTGGTGAGGGAGAGAAAGCATGTGAGTGCTTGGTGGGATGATATTAGCACCAGGCCTTCTTGGCAAAAGGTGCTCCAGCTTTACAAATACCCTGTCTAG 648 0.429 MVVKVYGPTYAAPKGVVMCLIEKEIEFESVPVDLSKGENKTPEFLKIQPFGKIPVIQDGDYTLYESRAINRYLAEKYKNQGTELLGKTIEERGLVEQWLEVEAQNFHPPLHKLVLHVLFAPIRGFPSDPKVIEESEVKLLKVLDIYEERLSKSKYLAGDFFSLADLSHLPFGYYLVNQTGRENLVRERKHVSAWWDDISTRPSWQKVLQLYKYPV* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1541 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 215 - -
Lja6g1541 215 CDD GST_N_Phi 2 76 - -
Lja6g1541 215 Pfam Glutathione S-transferase, C-terminal domain 111 202 IPR004046 -
Lja6g1541 215 SUPERFAMILY GST C-terminal domain-like 78 208 IPR036282 -
Lja6g1541 215 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Lja6g1541 215 SFLD Glutathione Transferase (cytosolic) 8 201 IPR040079 -
Lja6g1541 215 PANTHER GLUTATHIONE S-TRANSFERASE 2 215 - -
Lja6g1541 215 CDD GST_C_Phi 90 208 IPR034347 -
Lja6g1541 215 SFLD Main (cytGST) 8 201 - -
Lja6g1541 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 215 IPR010987 -
Lja6g1541 215 Gene3D - 86 208 - -
Lja6g1541 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Lja6g1541 215 SUPERFAMILY Thioredoxin-like 4 81 IPR036249 -
Lja6g1541 215 Gene3D Glutaredoxin 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1541 Lja-Chr6 41814043 41815546 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1541 1 215 Glutathione S-transferase Gene Family AT2G30870 61.395 3.26e-99 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1541 K00799 - gmx:547589 365.925