Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1538 ATGAGGCCAAGTAGAATGGAAAAAATGTACACACTATGGCTCTTTTTGATTGAAATCTTTTTACATATTTCCACATCAAGCAGTGGCAAAGTCCCTGCAATTATAGTGTTTGGAGACTCCTCTGTGGATTCAGGTAACAACAACTTCATTCCAACCATGGCCAAAAGCAACTTTGAGCCTTATGGTCGTGATTTTCCAGATGGAAATCCCACTGGTCGCTTCTCCAATGGCCGCATTGCTCCTGATTTCATTTCTGAGGCCTTTGGCCTTAAGCCAACAATCCCTGCTTACTTGGATCCTGCTTATAGCATATCAGATTTTGCTTCTGGTGTTTGCTTTGCATCTGCTGGAACTGGCTATGATAATAGCACTTCAAATGTTGCTGATGTCATACCTCTATGGAAAGAAGTTGAGTACTACAAGGACTACCGACAGAAATTGGTAGCATATCTTGGTGATGAGAAGGCTAATGAAATAGTAAAGGAGGCTTTGTATTTGGTCAGCATAGGAACAAATGATTTTCTTGAGAACTATTACACATTCCCAGAAAGAAGGTGCCAATTCCCTTCTGTTCAGCAGTATGAGGATTTTCTCATTGGACTTGCTGAAAACTTCATCAAGCAAATTTATGAGCTTGGAGCAAGAAAAATTTCTCTTACAGGGTGTCCACCCATGGGGTGTCTGCCATTGGAGAGGGCCGTCAACATTTTGGACCACCATGGTTGTTCGGAAGAATACAACAATGTGGCTTTGGAATTCAATGGAAAGTTGGGATTGTTAGTGAAAAAGATGAACAAGGAGCTTCCAGGGCTTCAATTAGTAGATGCAAATGCATATGATATGCTGCTGCAAATTGTTACACAGCCTTCTTATTTTGCAGGTTTTGAAGTTGCTGGAGTGGGATGCTGTGGAACAGGAAGATTTGAGATGGGTTACATGTGCGACCCAAAAAGCCCATTTACATGCACAGATGCAAATAAATATGTATTTTGGGATGCTTTCCACCCCTCACAAAAAACAAGTCAGATAGTCTCAAATTATTTGATAGAAAAACATTTGGCAAAATTTCTTTGA 1074 0.406 MRPSRMEKMYTLWLFLIEIFLHISTSSSGKVPAIIVFGDSSVDSGNNNFIPTMAKSNFEPYGRDFPDGNPTGRFSNGRIAPDFISEAFGLKPTIPAYLDPAYSISDFASGVCFASAGTGYDNSTSNVADVIPLWKEVEYYKDYRQKLVAYLGDEKANEIVKEALYLVSIGTNDFLENYYTFPERRCQFPSVQQYEDFLIGLAENFIKQIYELGARKISLTGCPPMGCLPLERAVNILDHHGCSEEYNNVALEFNGKLGLLVKKMNKELPGLQLVDANAYDMLLQIVTQPSYFAGFEVAGVGCCGTGRFEMGYMCDPKSPFTCTDANKYVFWDAFHPSQKTSQIVSNYLIEKHLAKFL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1538 357 CDD SGNH_plant_lipase_like 32 351 IPR035669 -
Lja6g1538 357 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 356 - -
Lja6g1538 357 SUPERFAMILY SGNH hydrolase 161 350 - -
Lja6g1538 357 Pfam GDSL-like Lipase/Acylhydrolase 34 348 IPR001087 GO:0016788
Lja6g1538 357 PANTHER GDSL ESTERASE/LIPASE EXL3 7 356 - -
Lja6g1538 357 Gene3D SGNH hydrolase 20 354 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1538 Lja-Chr6 41787720 41790375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1538 11 350 Pollen Coat Proteome AT1G75910 35.673 6.92e-64 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1538 - - gmx:100819256 596.275