Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1529 ATGACTGAGGCAGGGCCGGTGCTGTCCATGTCCCTAGGATTTGCAAAGCAACCGTTCCCCACAAAGTCAGGTTCATGTGGTACTGTTGTGAGAAATGCTGAGCTCATGGTTCTTGACCCTGAAACTGGTTGTTCTCTTGGCTATAATCAACCCGGTGAAATTTGCATCCGAGGCCAACAGATCATGAAAGGATATTTGAACGATGAGAAGGCCACAGCCACAACAATCGATGCGGAAGGTTGGCTTCACACCGGTGATGTTGGTTACATTGATGATGATGATGAGATTTTCATAGTTGACAGGGTGAAGGAACTCATCAAATTCAAAGGCTTCCAAGTGCCCCCAGCTGAACTCGAAGGCCTTCTCGTAAGCCATCCCTCAATTGCAGATGCAGCTGTCGTCCCACAAAAGGATGCTGCTGCTGGTGAAGTTCCCGTTGCCTTTGTTGTGAGATCAAATGGGTTTGATCTAACTGAAGAGGCTGTAAAGGAGTTCATATCCAAACAGGTGGTGTTTTATAAAAGACTGCACAAGGTTTACTTTGTTCATGCAATTCCCAAGTCTCCATCAGGAAAGATATTGAGGAAAGACCTCAGAGCAAAGCTAGAAAATGGAAATCAGAAGCCATAG 630 0.4587 MTEAGPVLSMSLGFAKQPFPTKSGSCGTVVRNAELMVLDPETGCSLGYNQPGEICIRGQQIMKGYLNDEKATATTIDAEGWLHTGDVGYIDDDDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDAAAGEVPVAFVVRSNGFDLTEEAVKEFISKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLENGNQKP* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1529 209 Pfam AMP-binding enzyme C-terminal domain 117 192 IPR025110 -
Lja6g1529 209 PANTHER 4-COUMARATE--COA LIGASE 2 1 202 - -
Lja6g1529 209 SUPERFAMILY Acetyl-CoA synthetase-like 1 204 - -
Lja6g1529 209 Gene3D - 104 206 IPR045851 -
Lja6g1529 209 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 202 - -
Lja6g1529 209 Pfam AMP-binding enzyme 1 108 IPR000873 -
Lja6g1529 209 Gene3D - 1 103 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1529 Lja-Chr6 41711607 41713129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1529 1 170 Monolignol Biosynthesis Gene Families AT1G51680 73.529 3.15e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1529 K01904 - lja:Lj6g3v0933470.1 421.394