Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1525 ATGGAAAAAATGTACACACTATGGCTCTTTTTGATTGAAATCTTTTTACATGTTTCCACATCAAGCAGTGGCAAAGTCCCTGCAATTATAGTGTTTGGAGACTCCTCTGTGGATTCAGGTAACAACAACTTCATTCTAACCATGGCCAAAAGCAACTTTGAGCCTTATGGTCGTGATTTTCCAGATGGAAATCCCACTGGTCGCTTCTCCAATGGCCGCATTGCTCCTGATTTCATTTCTGAGGCCTTTGGCCTTAAGCCAACAATCCCTGCTTACTTGGATCCTGCTTATAGCATATCAGATTTTGCTTCTGGTGTTTGCTTTGCATCTGCTGGAACTGGCTATGATAATAGCACTTCAAATGTTGCTGATGTCATACCTCTATGGAAAGAAGTTGAGTACTACAAGGACTACCGACAGAAATTGGTAGCATATCTTGGTGATGAGAAGGCTAATGAAATAGTAAAGGAGGCTTTAAGGTGCCAATTCCCTTCTGTTCAGCAGTATGAGGATTTTCTCATTGGACTTGCTGAAAACTTCATCAAGCAAATTTATGAGCTTGGAGCAAGAAAAATTTCTCTTACAGGGTGTCCACCCATGGGGTGTCTGCCACTGGAGAGGGCCGTCAACATTTTGGACCACCATGGTTGTTCGGAAGAATACAACAATGTGGCTTTGGAATTCAATGGAAAGTTGGGATTGTTAGTGAAAAAGATGAACAAGGAGCTTCCAGGGCTTCAATTAGTAGATGCAAATGCATATGATATGCTGCTGCAAATTGTTACACAGCCTTCTTATTTTGCAGGTTTTGAAGTTGCTGGAGTGGGATGCTGTGGAACAGGAAGATTTGAGATGGGTTACATGTGCGACCCAAAAAGCCCATTTACATGCACAGATGCAAATAAATATGTATTTTGGGATGCTTTCCACCCCTCACAAAAAACAAGTCAGATAGTCTCAAATTATTTGATAGAAAAACATTTGGCAAAATTTCTTTGA 999 0.4094 MEKMYTLWLFLIEIFLHVSTSSSGKVPAIIVFGDSSVDSGNNNFILTMAKSNFEPYGRDFPDGNPTGRFSNGRIAPDFISEAFGLKPTIPAYLDPAYSISDFASGVCFASAGTGYDNSTSNVADVIPLWKEVEYYKDYRQKLVAYLGDEKANEIVKEALRCQFPSVQQYEDFLIGLAENFIKQIYELGARKISLTGCPPMGCLPLERAVNILDHHGCSEEYNNVALEFNGKLGLLVKKMNKELPGLQLVDANAYDMLLQIVTQPSYFAGFEVAGVGCCGTGRFEMGYMCDPKSPFTCTDANKYVFWDAFHPSQKTSQIVSNYLIEKHLAKFL* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1525 332 PANTHER GDSL ESTERASE/LIPASE EXL3 2 159 - -
Lja6g1525 332 Gene3D SGNH hydrolase 15 329 IPR036514 -
Lja6g1525 332 Pfam GDSL-like Lipase/Acylhydrolase 29 323 IPR001087 GO:0016788
Lja6g1525 332 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 160 331 - -
Lja6g1525 332 CDD SGNH_plant_lipase_like 27 326 IPR035669 -
Lja6g1525 332 PANTHER GDSL ESTERASE/LIPASE EXL3 160 331 - -
Lja6g1525 332 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1525 Lja-Chr6 41650084 41652924 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1525 6 325 Pollen Coat Proteome AT1G75910 34.012 1.14e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1525 - - gmx:100819256 540.421