Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1502 ATGGTAACCATTACGGCTTCACACACTGTCCTTCCGAACCAATCAACTCCACATTGTCATTTATGGCTTTCCGATGTGGACCAAATGATGTGTCACCACTACACACACTATCTCTACATCTACAAGGCAAAACACGACCAGAATTTCATAGAGAAGATGAAGAACTCTCTTAGCAAGATTCTAGTTCACTACTATCCTGTAGCTGGCCGTTTGCGCTTCACGGAAAATGATCGAGCCGAAATCAATTGTAATGCCAAGGGGGTCATCTTGCAAGAAGCTGAAACAACAAAAACAATGGCTGATTTTGGAGACTTTTCACCCTCTCACTCCACCTCACAACTTATTCCAACAATTGATTTCACTCAGCCTAATGAGGAGCTTCCCCTAGTATTGGTGCAAGTCACACGATTCAATGGTGGTGATGACGGCCTAGCTATTGGGGTTGCTTGGGTCCACTCTTTGTCTGATGGGCTTGGTGCCACTCGCTTCATCGGCTCATGGGCGAAGATAGTTCGAGGGGACACGCTAGAGCCCCATGAACTTCCCTTTCTAGATCGAACAGTATTCAAATTCTCACACCCCCCTTTGGCACCACGTTTTGAGCACAACGAGTTGAAGCCTCTGCCACTTATTCTAGGAAGCTCCGATTGTAGTGTTGAAAGAAATAAGAAGGTAATTTCAGAAACTTTTAGACTCACGCCAGAGCAAGTGGCGAAGCTGAAGAAGGAGGCCAATGGTAATGTCCTAGAAGGGTCAAGACCTTACAGCAGATTTGAAATTATTGCCGCACATATATGGAGATGTGCTTCTAAGGCCCGTGAGCTAGATCAGAATCAACCAACTGAGGTTAGGTTTCATGCTGAAAATAGAAACAGAATGGTTCCACCTCTACCTGGTAATTATTTTGGGAATGCTGTGACACTGACCGGAGCAGCCAGTTTTGTTGGGGAACTCACAGCAGAGCCTTTGAGTCATGCTGCACAGAAGATAAGGGAAGCAATTGAGGTGGTGAGTGATGAGTACATAAGGTCGCAGATTGATGTTCTAAGGAGTCAGAAGCATTTGGATGATGCAAGGGCTTTATATTTTGGTGTTAGAGGTAAGAATCCCCCATTTGCTGGGAATCCTAATCTTCGTTTCGCAAGTTGGATGAGCATGCCAGCATATGAAGCAGATTTTGGTTGTGGAAAACCTGTGTACTTTGGCCTAGCAAATGAGTCCCCTCATGACAGGGCAGTGATTCTTCTAAGCCCCGATGGGGATGGCTCTGTTACTGTGATAATGTTATTCCAGATACCACACATGCAACTTTTTAAGAAATTCTTCTATGCGGATATGTCCACTTCTAGCGAAGTTACTATCGGTTAG 1368 0.4496 MVTITASHTVLPNQSTPHCHLWLSDVDQMMCHHYTHYLYIYKAKHDQNFIEKMKNSLSKILVHYYPVAGRLRFTENDRAEINCNAKGVILQEAETTKTMADFGDFSPSHSTSQLIPTIDFTQPNEELPLVLVQVTRFNGGDDGLAIGVAWVHSLSDGLGATRFIGSWAKIVRGDTLEPHELPFLDRTVFKFSHPPLAPRFEHNELKPLPLILGSSDCSVERNKKVISETFRLTPEQVAKLKKEANGNVLEGSRPYSRFEIIAAHIWRCASKARELDQNQPTEVRFHAENRNRMVPPLPGNYFGNAVTLTGAASFVGELTAEPLSHAAQKIREAIEVVSDEYIRSQIDVLRSQKHLDDARALYFGVRGKNPPFAGNPNLRFASWMSMPAYEADFGCGKPVYFGLANESPHDRAVILLSPDGDGSVTVIMLFQIPHMQLFKKFFYADMSTSSEVTIG* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1502 455 Gene3D - 214 444 IPR023213 -
Lja6g1502 455 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 446 - -
Lja6g1502 455 Pfam Transferase family 1 443 - -
Lja6g1502 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 446 - -
Lja6g1502 455 Gene3D - 1 207 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1502 Lja-Chr6 41119307 41121348 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1502 2 443 Monolignol Biosynthesis Gene Families AT5G48930 35.874 2.65e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1502 K13065 - gmx:100778626 560.836