Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1490 ATGGCAAACAGTGAGCTGAAGCTTCTTGGTAAATGGTCGAGTCCTTATGTGATTAGGGTGAAGATTGCCCTCAGAATCAAATCCCTTGAATATGAAAACCTTGAAGAGCACGAAACATTCTCCCCCAAAAGCGACCTTCTTCTTCAATCCAACCCTTTGAGGTTTCTATGGTATTGGTTTCCTACGATAGAAACCATTGTAACTGTTGATGAGGAAGAAAGGAAGCCATATTATGATATATTGGATACAGTGCTTGAAAATATGGAGGATGCTTTTGTCAAATGCAGTAAAGGAAAGGCCTTTTTCGAACAAGAGTATCAAAGGAAAGTTCTGGTTGAATCAAAGGCTCCAGCTTTGGTTAAATGGGCTGAAAGGTTTGTTGCTGACCCTGCTGTCAAGGGGATTATACCTGAGACTGACAGGGTTGTTAAGCTTTCTAGGGCTTTTCGGATCAAATGGAGAGCTGAACTTGGTAAGAAATAG 483 0.412 MANSELKLLGKWSSPYVIRVKIALRIKSLEYENLEEHETFSPKSDLLLQSNPLRFLWYWFPTIETIVTVDEEERKPYYDILDTVLENMEDAFVKCSKGKAFFEQEYQRKVLVESKAPALVKWAERFVADPAVKGIIPETDRVVKLSRAFRIKWRAELGKK* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1490 160 SUPERFAMILY Thioredoxin-like 3 54 IPR036249 -
Lja6g1490 160 Gene3D - 103 158 - -
Lja6g1490 160 Gene3D Glutaredoxin 1 57 - -
Lja6g1490 160 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 53 IPR045073 -
Lja6g1490 160 PANTHER GLUTATHIONE S-TRANSFERASE U17 105 146 - -
Lja6g1490 160 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 53 - -
Lja6g1490 160 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 105 146 IPR045073 -
Lja6g1490 160 SUPERFAMILY GST C-terminal domain-like 54 147 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1490 Lja-Chr6 40784770 40786045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1490 5 155 Glutathione S-transferase Gene Family AT1G59700 30.222 1.05e-22 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1490 K00799 - cam:101508281 197.593