Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1484 ATGCAGCAGCCAGATCACAGGAAAAAGAGTTCAACAGAGATGGACTTTTTCTCTGAATATGGTGATGCCAACCGGTACAAAATTCAAGAAGTCATAGGAAAAGGAAGTTATGGTGTTGTCTGTTCAGCGATTGACACTCACACTGGTGAAAAAGTGGCAATTAAAAAGATTCATGACATCTTCGAACATATTTCTGATGCTGCACGTATTCTCCGTGAGATAAAGCTGCTTAGACTCCTGCGACATCCCGATATTGTTGAAATAAAGCACATTATGCTTCCTCCTTCTCGGAAGGACTTCAAAGATATTTATGTTGTTTTTGAGCTCATGGAGTCGGATCTTCATCAAGTCATTAAAGCAAATGATGACTTAACAAAAGAGCACTATCAGTTTTTCCTCTATCAATTACTTCGAGCTTTGAAGTATATTCACACCGCAAATGTCTATCATCGAGATTTGAAGCCAAAAAATATACTGGCTAATGCAAACTGCAAACTCAAAATTTGTGATTTTGGGTTAGCTAGAGTTGCCTTCAGTGACACCCCAACAACTATATTTTGGACGGATTATGTTGCGACAAGGTGGTATAGAGCTCCCGAGCTATGTGGATCATTTTACTCTAAGTATACACCAGCGATTGATGTATGGAGTATAGGTTGCATCTTTGCTGAAGTACTAGCAGGAAAGCCGCTTTTTCCTGGAAAAAATGTAGTCCATCAGTTGGATCTGATGACAGATCTGCTTGGGACTCCCTCACTGGATACTATATCACGGGTTCGCAATGAGAAGGCAAGGAGATACCTAACTAGCATGAGGAAAAAGCAACCTGTGCCGTTTGCACAAAAATTTTCTAATGCAGACCCTTTAGCACTACGACTGTTGGAAAGGTTACTGGCTTTTGATCCGAAAGACCGGCCCACTGCTGAAGAGGCACTAGCTGATCCCTACTTCAAGGGACTAGCAAAAGTTGAGAGGGAACCATCCTGCCAGCCTATTTCGAAAATGGAGTTTGAATTCGAAAGACGGAGAGTCACGAAGGAAGAAATTCGAGAGCTAATTTTCCGTGAGATTCTTGAGTATCATCCACAACTATTGAAAGACTATATGAATGGAACAGAGAGAACTAACTTTCTTTATCCAAGTGCTGTTGATCAATTCAGAAAGCAGTTTGCTCATCTAGAGGAAAATGGTAAAAGTGGGCCTGTTATGCCACTTGATAGAAAGCATGTTTCTCTTCCAAGGTCAACAATTGTGCATTCAAATACCGTGCACCATAAAGAGCAAATAAATATTGCTTCCAGCAAAAACCAACATATATCTGAGGAATATAATAAGAATCCCAGAGATACAGAAAATCCAGTGCTAAGGTCGTTGCAGGGGCCCCAAAGAATTCCATTAGCAAAACCTGGTAAAGTTGTTGGACCTGTTGTTCCATACGAGTACGGTACTGTTGTCAAGGATTCTTATGATCCAAGAGCATACATAAGAGGTTCTGTTCTTCCTTCTCAACCTGTTCCTGCAGCATATTATTATCAAAGACCTAGCCCTGGAATTCAAGAAAGGCCAGGACCAGAAGTTGATAAAGGTGTTCCTTTGCAAGCAAAACATGCACAGCAATGTGGCGTGAATGCCAAAATTGCACCGGAGATAGCTATTAATATCGATACAAATCCATTTTTCATGACGCGTGCAGGGGTGAACAAGTTAGAACAAGGTGATCAAATAGCCATAGAAACAAACTTGCTGCAGTCGAAGGCTCCATATGGTGGAATCAATGCTGCAGCTGGGGCCACTGCTCATAGAAAGGTTGGTCCTGTTCAGTATGGTATGGCAAGAATGTTCTAG 1845 0.4141 MQQPDHRKKSSTEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDVWSIGCIFAEVLAGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPVPFAQKFSNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGKSGPVMPLDRKHVSLPRSTIVHSNTVHHKEQINIASSKNQHISEEYNKNPRDTENPVLRSLQGPQRIPLAKPGKVVGPVVPYEYGTVVKDSYDPRAYIRGSVLPSQPVPAAYYYQRPSPGIQERPGPEVDKGVPLQAKHAQQCGVNAKIAPEIAINIDTNPFFMTRAGVNKLEQGDQIAIETNLLQSKAPYGGINAAAGATAHRKVGPVQYGMARMF* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1484 614 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 494 - -
Lja6g1484 614 ProSiteProfiles Protein kinase domain profile. 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1484 614 Gene3D Phosphorylase Kinase; domain 1 41 363 - -
Lja6g1484 614 CDD STKc_TDY_MAPK 25 362 - -
Lja6g1484 614 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 494 - -
Lja6g1484 614 ProSitePatterns MAP kinase signature. 61 164 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lja6g1484 614 ProSitePatterns Protein kinases ATP-binding region signature. 32 56 IPR017441 GO:0005524
Lja6g1484 614 Pfam Protein kinase domain 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1484 614 SMART serkin_6 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1484 614 Gene3D Transferase(Phosphotransferase) domain 1 112 340 - -
Lja6g1484 614 SUPERFAMILY Protein kinase-like (PK-like) 22 321 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1484 Lja-Chr6 40709482 40715854 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1484 1 452 MAP Kinase Gene Family AT2G42880 85.872 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lja6g1484 Pkinase 1.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1484 - - gmx:100811788 1118.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1484 6 40709482 40715854 Lja6g1484 6 40709482 40715854 ECH