Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1475 ATGCACTTGAAGCTTGGTGAGCTTTCCTGCATAGTGGTATCTTCCCCAGAAATTGCCAAAGAGGTGATGAAAACACACGACATCAACTTTTCAAACAGGCCACCTTTTCTTGCAGCACAAATCATCAGTTACGGTTCCAAAGGGATCACTTTTTCCCCACATGGAACCTATTGGAGACAGATGAGGAAGATTTGCACCATGGAGTTGCTATCAGCAAAGCGTGTTGAGTCCTTCAGGTCAGCAAGAGAAGGAGAGTTGTCAAAATTTGTTAAAGATTTGATTTTGAGTGAAGGGTCACTGATTAATCTCAGTGAGAAGCTTGATTCGTTAGCATATGATTTAACATCAGGTGTAGTTTTTGGTGGTGCTATACAAGCTAAAGGTAAAGAGCAATATAGAAAACTAACCAAGGATGTGTCAAAGACTAAACTTGAGAAGCTCCACCGTGAGATGGACAAGATAATAGAGGACATTGTAACACGTCATAGAGACAAGAATTTGAAAACAGGGGAAACAGGGGAAGATCTTGTTGATGTTCTTTTGAAACTGCAAAAGCGTAGTGATCTTGAGCATCCCTTATCAAACAATATAATCAAAGCTACAATTTTGGTTAGTATATTACTGTTTAACAAGCAAAGCACAAGTGGATCAGACACCACATCTCTCACCCAAAACCTTAAGGCATTGGGTTTATGGGTCCATATACTTATAAACTGCTCAAAGTTATTTTTATTTTCTAATGTAGGACTTACTCACACTTGA 762 0.3898 MHLKLGELSCIVVSSPEIAKEVMKTHDINFSNRPPFLAAQIISYGSKGITFSPHGTYWRQMRKICTMELLSAKRVESFRSAREGELSKFVKDLILSEGSLINLSEKLDSLAYDLTSGVVFGGAIQAKGKEQYRKLTKDVSKTKLEKLHREMDKIIEDIVTRHRDKNLKTGETGEDLVDVLLKLQKRSDLEHPLSNNIIKATILVSILLFNKQSTSGSDTTSLTQNLKALGLWVHILINCSKLFLFSNVGLTHT* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1475 253 Gene3D Cytochrome P450 1 229 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1475 253 PANTHER CYTOCHROME P450 71B11-RELATED 1 142 - -
Lja6g1475 253 PANTHER CYTOCHROME P450 71B11-RELATED 141 205 - -
Lja6g1475 253 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 142 - -
Lja6g1475 253 SUPERFAMILY Cytochrome P450 2 223 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1475 253 Pfam Cytochrome P450 2 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1475 253 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 141 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1475 Lja-Chr6 40588717 40590291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1475 1 227 Cytochrome P450 AT3G26320 31.008 3.57e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1475 - K23806 lja:Lj6g3v0920770.1 278.1