Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1467 ATGAAGATCTCTTTCAGGAGCTCAGCAAGTTGGAAATGTATATGTTCAGTAAAAAGAGGAAGATCATGCCCCCAATGCTCTGATGAACCTCACTGGAAGATTTTTTCAGGTCAATATATTGGAGATGCTCAAATGCAAATCAGTACTATAGCTGGTAATCAAGTGCCTAGCTATTTTGTGTGGGAAGTCCTTTTTACTATGTCCATCATGGGATTGGGACTCTTGCTTTTTGCAATTCTCATTGGAAACATACAGAATTTTCTACAGGCTCTTGGGCGGAGGAAGCTGGAAATGCAACTTAGAGGTCGTGATGTTGAGCAATGGATGAGCCATCGGCGCTTACCAGTAGACCTGAGAAGGAGAGTAAGACAGGCTGAACGGTATAATTGGGCTGCAACAAGGGGGGTGAATGAAGAAATGGTTATGGAGAATCTACCAGAAGATCTGCAGAGAGACATTAGACGCCATCTCTTCAGATTTGTTAAGGAAGAAAATCATTTTGCCAGAGTATGGAACTAG 519 0.4239 MKISFRSSASWKCICSVKRGRSCPQCSDEPHWKIFSGQYIGDAQMQISTIAGNQVPSYFVWEVLFTMSIMGLGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQWMSHRRLPVDLRRRVRQAERYNWAATRGVNEEMVMENLPEDLQRDIRRHLFRFVKEENHFARVWN* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1467 172 SUPERFAMILY Voltage-gated potassium channels 47 89 - -
Lja6g1467 172 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 46 167 - -
Lja6g1467 172 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 46 167 - -
Lja6g1467 172 SUPERFAMILY cAMP-binding domain-like 94 164 IPR018490 -
Lja6g1467 172 Gene3D Helix hairpin bin 93 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1467 Lja-Chr6 40474344 40476572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1467 46 168 Ion Channels AT3G17700 76.423 6.81e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1467 K05391 - lja:Lj1g3v1135200.2 223.016