Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1466 ATGACATGGTATCTTGAACATTCTTCTGTAAGCTCAGATGGTAGAAAAGTAAGGCTTCCTGGACAGAGGTTGGTTAGCAACAGGACAGTAAATTGCTTGACAAATGTGGAGGCATTTTCACTCTCTGCCGCCGACCTTGAAGAAGTCACGATACTTTTCACAAGATTCTTGCGGCGCCCTCAGGTCCAAGGAGCTTTAAGGTATGAATCGCCTTATTGGAGATCCCTTGCCGCAAACCGCATTCAAGTTGCATGGAGATATAGACAGAAACGTCTGAGTCGTGTTAATTCCTCAGTAACAACTAAACATTGA 312 0.4423 MTWYLEHSSVSSDGRKVRLPGQRLVSNRTVNCLTNVEAFSLSAADLEEVTILFTRFLRRPQVQGALRYESPYWRSLAANRIQVAWRYRQKRLSRVNSSVTTKH* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1466 103 Gene3D Jelly Rolls 1 55 IPR014710 -
Lja6g1466 103 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 1 98 - -
Lja6g1466 103 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1466 Lja-Chr6 40473542 40474303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1466 17 94 Ion Channels AT2G24610 45.570 1.44e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1466 K05391 - gmx:100781973 180.644