Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1445 ATGGAGTTGCTTTCAGTCTCAGTCTCAGGATGTACAATAATCTGGGTTGTGATGACAGTGATAGTTGCTGTGATTCCAATATGGGCCTTGCAGGTGCTGTGGCTGAAACCAAAGAAGATGGAAAATCTTCTAAGAGCTCAAGGTCTTCAAGGCCAACCTTACAAGCTTGACCTTTTCTGTGCCGAACTCAAGCAAAACTACATGCTCAAGTTGCAACATGAAGCCAACTCCAAACCCATTACTCTCTCCAATGATGTTGCACCGGATGTATTCTTGTCTCCCCATCAAGCTGTCCTCAAATATGGTAAGAATTCCTTTTTATGGGAAGGTAGGAAACCAAAGGTGATCATCACAAACCCAGAAGAAATCAAACAAGTCTTTAACAAGATGCAAGACTACCCTAAACCAAAGTTAAGTTCCATTGCCAAATTTTTTAGCGTTGGTCTCATAGAATATGAAGGTGAAAAATGGGCTAAGCATCGAAAAATTATTTCCCCGGCATTCCACCCAGATAAATTGAAAAGTATGCTACCAGCTTTTTTAAAAAGCAGCCAGGATATGATTAGCAAATGGAAGGAAATGTTGGCATCAAAGGATGGAACAACATGTGAGATTGATGTTTGGCCTTTTCTTCAGGATTTAACTTGTGATGCAATTTCTAGAACGGCATTTGGAAGCAGCTATGCTGAAGGAACCAAAATATTTGAGCTTCTCAAAAGGCAGGGGTATCTTTTAATGAAAGCACAGTATGCTCACATTATTCCAATCTTGATGTTTCTACCAACTGCCACAAATAGGATGATGAAGGAAATCAACAGAAATATTAGTGATTCAGTTGTGAGTATCATTAAAAAACGAGAGCAAGCCATGAAGAATGGCGAAGCCACAAATATTGAATTTTTAGGCCTAGTTTTGGAATCAAATCACAGTGAAAATCAAGGACATGGAAACAGTAAGATTAATGGAGGAATGACTGACCAAGATGTAATTGAGGAATGCAAGCTATTCTACCTTGCTGGGCAAGAGACCACTGCAAATTTGCTGGTTTGGACAATGGTGTTATTGGCTAGGCATCCTGAATGGCAAGCACGTGCACGGCAAGAAGTTTTGCAAGTTTTTGGCAACCAAAATCCAAACAATGATGGATTGAGTCACTTGAAAATTATGACAATGATTCTATATGAGGTTCTTAGGTTATATCCACCTGCAATTTACTTCAACCGTGTTGTTCCAGAGGATTTGAAACTTGGAGACCTTTCACTACCTGCAGGAACTCACATTTCCATACCAATACTTTTGATCCACCATGATAATGATATATGGGGTGATGATGCAAAGGAGTTCAGACCTGAGAGGTTCTCAGAAGGCATTGCTAAGGCCACAAAAGGCCAACTTTCATATTTCCCATTTGGATGGGGTCCTAGAATGTGTATTGGCCAAAACTTTTCGCTGTTAGAAGCAAAAAGCCAAGCAAAAACAGTATTGTCATTGCTTTTGCAGAATTTCTCATTTGAGCTTTCTGCGGCCTATAAACATGTTCCCACAACTCTGCTTACTTTGAAGCCAAAAAATGGGGTGCAACACATTCTCCATAAATTGTAA 1602 0.3983 MELLSVSVSGCTIIWVVMTVIVAVIPIWALQVLWLKPKKMENLLRAQGLQGQPYKLDLFCAELKQNYMLKLQHEANSKPITLSNDVAPDVFLSPHQAVLKYGKNSFLWEGRKPKVIITNPEEIKQVFNKMQDYPKPKLSSIAKFFSVGLIEYEGEKWAKHRKIISPAFHPDKLKSMLPAFLKSSQDMISKWKEMLASKDGTTCEIDVWPFLQDLTCDAISRTAFGSSYAEGTKIFELLKRQGYLLMKAQYAHIIPILMFLPTATNRMMKEINRNISDSVVSIIKKREQAMKNGEATNIEFLGLVLESNHSENQGHGNSKINGGMTDQDVIEECKLFYLAGQETTANLLVWTMVLLARHPEWQARARQEVLQVFGNQNPNNDGLSHLKIMTMILYEVLRLYPPAIYFNRVVPEDLKLGDLSLPAGTHISIPILLIHHDNDIWGDDAKEFRPERFSEGIAKATKGQLSYFPFGWGPRMCIGQNFSLLEAKSQAKTVLSLLLQNFSFELSAAYKHVPTTLLTLKPKNGVQHILHKL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1445 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Lja6g1445 533 Pfam Cytochrome P450 99 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1445 533 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 14 527 - -
Lja6g1445 533 SUPERFAMILY Cytochrome P450 90 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1445 533 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1445 533 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1445 533 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1445 533 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1445 533 Gene3D Cytochrome P450 80 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1445 533 PANTHER CYTOCHROME P450 FAMILY MEMBER 14 527 - -
Lja6g1445 533 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1445 533 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1445 533 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1445 533 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1445 533 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1445 533 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1445 Lja-Chr6 40198922 40203823 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1445 4 533 Cytochrome P450 AT3G14690 49.156 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1445 - K17873 ag:BAL45207 722.235