Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1433 ATGATTCTGCTGTCAAGGTATTTTCAAAACCTGAACCTGAAGCAATGGTGCAGTTACACTAACACTGACACCACACCCCTGCAGCTAGTAGCAATATTCTTGATCATTTCCACGGTTACTTGGTATGCATGGCTCTTCTTCTTCAAACCCAAAACCCAGAGCCTGCCACTGCCACCTGGCCCACCGGGCCTCCCCATATTCGGAAACCTTCTATCTCTCGACCCGGAACTTCACACGTACTTCACCGGGTTAGCCCGGACCCACGGCCCGATTTTCAAGCTCCGGCTCGGGAGCAAGCTCGGCATCGTGGTGTCTTCACCTTCCGGTGAACGGGTGAAGATGGAGGAGGCGGAGAGGATTCAAAGCAAGGATTTTCTGCAGTTTTTGTTGAATTCGAAGGAAGATGGTGATTCCATGACCTCATTTACCATAACCCACGTTAAGGCCCTTCTCATGGACATGCTTGTAGGTGGAACTAACATGTCTTCCAACACAATTGAGTTTGCAATGGCGGAAATGATGCACAAGCCAGAGATAATGAAGAGAGTTCAAGAGGAATTGGAAGCTGTAGTTGGGAAAGATAACATAGTAGAAGAGTCTCATATTCACAAGTTGTACTACTTGGATGCTGTGATGAAGGAAACTCTTAGGTTGCACCCAATGCTTCCACTTTTAGTCCCACACTGCCCCAGTGAAGACACTGCTGCAGGAGGCTACACAATCCCAAAGGGATCTCGGGTGTTTGTGAATGCGTGGGCTATTCAGAGGGACTCTTCTATTTGGGAGAAACCACTAGAATTTGATCCTACAAGGTTCTTGGATACCAAATGGGATTATAGTGGGAGTGACTTCAGTTATCTTCCATTTGGGTCTGGAAGAAGAATATGTGTAGGAATAGCAATGGCTGAGAGGACAGTTTTGTACCTTCTTGCAACACTAGTGCACTTATTTGACTGGACAGTGCCCCGAGGTGAAATGTTAGATCTATCAGAAAAATTTGGTATTGTTCTCAAGAAGGAAACACCTCTGGTTGCCATCCCCGCCCCACGTTTGTCCAATCCTGATCTCTACCAATTTAATTGA 1083 0.4663 MILLSRYFQNLNLKQWCSYTNTDTTPLQLVAIFLIISTVTWYAWLFFFKPKTQSLPLPPGPPGLPIFGNLLSLDPELHTYFTGLARTHGPIFKLRLGSKLGIVVSSPSGERVKMEEAERIQSKDFLQFLLNSKEDGDSMTSFTITHVKALLMDMLVGGTNMSSNTIEFAMAEMMHKPEIMKRVQEELEAVVGKDNIVEESHIHKLYYLDAVMKETLRLHPMLPLLVPHCPSEDTAAGGYTIPKGSRVFVNAWAIQRDSSIWEKPLEFDPTRFLDTKWDYSGSDFSYLPFGSGRRICVGIAMAERTVLYLLATLVHLFDWTVPRGEMLDLSEKFGIVLKKETPLVAIPAPRLSNPDLYQFN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1433 360 PANTHER OS08G0547900 PROTEIN 110 358 - -
Lja6g1433 360 PANTHER OS08G0547900 PROTEIN 17 109 - -
Lja6g1433 360 SUPERFAMILY Cytochrome P450 113 350 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 Pfam Cytochrome P450 58 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 Pfam Cytochrome P450 119 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 SUPERFAMILY Cytochrome P450 54 108 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 110 358 - -
Lja6g1433 360 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 17 109 - -
Lja6g1433 360 PRINTS P450 superfamily signature 157 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 PRINTS P450 superfamily signature 210 221 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 PRINTS P450 superfamily signature 287 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 PRINTS P450 superfamily signature 296 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 Gene3D Cytochrome P450 47 111 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 Gene3D Cytochrome P450 112 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 PRINTS B-class P450 signature 73 84 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 PRINTS B-class P450 signature 287 296 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 PRINTS B-class P450 signature 210 221 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 PRINTS B-class P450 signature 256 271 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 PRINTS B-class P450 signature 296 307 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 PRINTS B-class P450 signature 228 255 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1433 360 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 289 298 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1433 Lja-Chr6 39988039 39989768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1433 74 357 Cytochrome P450 AT4G12300 56.747 3.90e-111 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1433 - - lja:Lj2g3v3137140.1 718.383