Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1423 ATGATTTCATCGTTGAGACAACCTAGTATAGGGATCACTGGTTCTGATGTTGTTTTGAGGAGAACACATGCAACAACCTTGCAGACACGGTCGTTTTTACCTTCTCTGTCAAGAGGAAGTGCTCTGAGATCATCATCCATGGTTTCAGTGCATAAGCCACTGCACCTTGCATCTGTTGGTGTTGGAGGAAGCTTTGGGATGAAGAATTTCGAGAATCTGGGAAGGGGTGATGATTTGGTGAAGTGTGGAGCGTATGAGGCTGATAAATCAGAGATTGAAGGTGCAGCAACACCATCTGAGGCTGCTAAGAAGGTGAAAATTGGGATATATTTTGCTACCTGGTGGGCTTTGAATGTGGTGTTCAATATTTATAACAAGAAGGTTTTGAATGCCTACCCTTACCCTTGGCTCACTTCAACTTTGTCACTGGCTTGTGGGTCTCTCATGATGTTGATCTCTTGGGCCACCAGGATTGCAGAGGCACCTAAGACTGATCTTGATTTTTGGAAGTCTCTATTCCCTGTTGCTGTTGCACATACAATTGGACATGTTGCGGCGACGGTTAGTATGTCGAAAGTTGCAGTATCATTTACCCATATCATCAAGAGTGGTGAGCCTGCTTTTAGTGTTCTGGTTTCAAGGTTTATTTTGGGTGAGAGCTTCCCTGCGCAAGTCTATCTATCTTTACTTCCAATCATTGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGGTTGGTTTTATGGGGGCTATGATATCAAATTTGGCATTTGTATTCCGGAACATCTTTTCTAAAAAGGGGATGAAGGGAAAGTCCGTCAGCGGAATGAATTACTATGCTTGTTTGTCTATTTTGTCCCTTGCGATTCTCACACCCTTCGCAATTGCTGTTGAAGGACCACAGATGTGGGCCGCTGGATGGCAAACGGCCGTCTCTCAAGTTGGACCCCAGCTAGTATGGTGGGTAGCAGCTCAGAGTGTATTCTATCATCTATACAATCAGGTGTCATACATGTCTCTGGATGAGATCTCTCCCTTGACATTTAGCATCGGAAACACCATGAAACGTATATCCGTCATAGTGTCTTCAATTATCATCTTCCAAACACCAGTTCAGCCCGTCAATGCTCTTGGAGCTGCTATTGCTGTCTTCGGAACCTTCTTATATTCACAGGTATTTTATAGTGTAATCGAATATCCGTCACTCTCATTGTTTATTGACCCTTTGGCCATATCATTTACCACTTCAAGAAAATGCTATTTTCATTCAAAACATGAAACACTGATAGCGTTACATATTATTGGTTGGAGAATACATTGCAAAGAGATAATTTGTTTAGGGTGTTCATGGATGAATTTGAATTCCCTGCAGTCAGGGTATTTGTAA 1398 0.4263 MISSLRQPSIGITGSDVVLRRTHATTLQTRSFLPSLSRGSALRSSSMVSVHKPLHLASVGVGGSFGMKNFENLGRGDDLVKCGAYEADKSEIEGAATPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLDFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGESFPAQVYLSLLPIIGGCALAAVTELNFNMVGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQMWAAGWQTAVSQVGPQLVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFQTPVQPVNALGAAIAVFGTFLYSQVFYSVIEYPSLSLFIDPLAISFTTSRKCYFHSKHETLIALHIIGWRIHCKEIICLGCSWMNLNSLQSGYL* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1423 465 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 241 - -
Lja6g1423 465 PANTHER SOLUTE CARRIER FAMILY 35 52 396 - -
Lja6g1423 465 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 52 396 - -
Lja6g1423 465 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 106 397 IPR004696 GO:0016021|GO:0022857|GO:0055085
Lja6g1423 465 Pfam Triose-phosphate Transporter family 106 394 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1423 Lja-Chr6 39866666 39872234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1423 1 395 Antiporters AT5G54800 73.827 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1423 K15283 - gmx:732659 644.039