Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1414 ATGGTAACCATTACAGCTTCTCACACTGTCCTTCCGAATCAACCAACTCCACAGTGTCGTTTATGGTTGTCCGATATGGACCAAGTGGTGCGTCAAAGTCACACACCGCTTCTCTACATCTACAAAGCAAAACACGACCATGATTGCATAGAGAGGATGAAGGAATCTCTTAGCAAGATTCTAGTTCACTACTATCCTATAGCTGGTCGTTTGAGCTTCACTGAAAATGGTCGAATGGAAATTGATTGTAAGGCCAAAGGGGTCGTATTGCTCGAAGCCGAAACAGCGAAAACAATGGCTGATTTTGGAGACTTTTCACCTTCTGGCTCCACCAAACAACTTATTCCAACAATTGATTATAATCACCCTGTTGAGGAGGTTCCATTGTTAGTGGTGCAGCTCACAAGATTCAATGGTGATGAAGGCCTTGCTGTTGGGGTTGCTTGGCACCACACTTTGTCTGATGGGATTGGTTTCACTCGTTTCATCTACTCATGGGCGAAGATAGCACGAGGGGACAAACTAGAGCCTCATGAATTGCCCTTTTTAGATCGAACATTACTCAAATTCTCACAGCCCCCATCAGCACCGCGCTTTGAACACAAAGAGTTAAAGCCTCTGCCACTTAATTTAGGAAGCTCCGATTGCAGTGTTGAAAGAAATAAAAAGGTGACTTCAGAATTATTAATACTTACACCACTACAAGTTGAGAAGCTGAAGAAGGAGGCCAATGGTAATGTCTTAGAAGGGTCAAGACCTTATAGCAGATATGAAGTTATTGGGGCGCATATATGGAGATGTGCATCTAAGGCTCGTGAGCTCGATCAAAACCAACCAACTGTGGTTAGATTCAATGTCGAAAATCGCAGTAGAATGGTTCCACCTCTACCTCCTAGCTATTTTGGGAATGCTTTGACACAGACAGCAGCAACAGGTTATGTTGGGGAAATCACATCAAAGCCTTTGAGCCATGTTGCACAGAAGATAAGGGAAGCAGTTGAGGTGGTGAATGATGAGTACATAAGGTCACAAATTGATGTTATAAGATGTCAGAAGCATTTGGATGATGCAAGGGCTTTGTTTTTAGGTGTAGAACTAGAAGGTGCTGCCCCATCTGGTGTGAATCCTAATTTTCATTTTACAAGCTGGATGAGCATGTCATTGTATGAAGCTGATTTTGGGAAGGGAAAACCTTTGTACTTTGGCCTAGGATATGTGTCCCCCAATGACAGGGCAATAATTCTTCTGAGCCCAGATGGGGATGGCTCTCTTATTGTGTTAATGTTCTTCCAGACGGTACACATACAACTTTTCAAGGATTTCTTCTACGCGGATATATCCACTTGTGATGGAATTACACGACCATCTAGGCTATGA 1377 0.4314 MVTITASHTVLPNQPTPQCRLWLSDMDQVVRQSHTPLLYIYKAKHDHDCIERMKESLSKILVHYYPIAGRLSFTENGRMEIDCKAKGVVLLEAETAKTMADFGDFSPSGSTKQLIPTIDYNHPVEEVPLLVVQLTRFNGDEGLAVGVAWHHTLSDGIGFTRFIYSWAKIARGDKLEPHELPFLDRTLLKFSQPPSAPRFEHKELKPLPLNLGSSDCSVERNKKVTSELLILTPLQVEKLKKEANGNVLEGSRPYSRYEVIGAHIWRCASKARELDQNQPTVVRFNVENRSRMVPPLPPSYFGNALTQTAATGYVGEITSKPLSHVAQKIREAVEVVNDEYIRSQIDVIRCQKHLDDARALFLGVELEGAAPSGVNPNFHFTSWMSMSLYEADFGKGKPLYFGLGYVSPNDRAIILLSPDGDGSLIVLMFFQTVHIQLFKDFFYADISTCDGITRPSRL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1414 458 Pfam Transferase family 1 443 - -
Lja6g1414 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 446 - -
Lja6g1414 458 Gene3D - 213 444 IPR023213 -
Lja6g1414 458 Gene3D - 1 206 IPR023213 -
Lja6g1414 458 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1414 Lja-Chr6 39738859 39741133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1414 2 443 Monolignol Biosynthesis Gene Families AT5G48930 36.547 1.26e-91 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1414 K13065 - gmx:100779814 562.762