Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1380 ATGAAGAAGATGTGGATTTTGCACAATCGGTTCGTTGTGTTCTGCATTGTTTGTTACCTCTGTTCTTCTCTGCAGCTTACGAGGGTTTCTTCATCCTCACCTGCTCCACACAGTGACCATGATCATATAAATTCAGATGTTGGAAGAACACTGCAGCAGGAGCAAGATGGTAATCATCAAATACATTGCTCAAGAGAAAGGAGTAGAGTAGCTTGGAAAATCATTCAAGAGTATTTGATGCCTTTCGTGGAGAAAGAAAAATATCATATCTCAAAAAGGTGTAGGCTTCACCCTGATAATGATATATACAGAGATCAGGAAGACCATAAGTCTCATATAGATATAAATGAATGGCAGTGTGGGTTCTGTAAGAAAAGTTTCTATGAAGAGAAACATCTTGATCAGCATTTCGACAACAGACACTCCAATTTACTTAATTCGAGTGAAAGCCGGTGCTTAGCCGACGTATGTGGTGCACTGCACTGTGACCTTGAAATAAATTCTGGGTCAAAAAAATCAAAGTGCAACCCTGCTGCCGCTGCAAGAAATAAACATCTGTGTGAGAGCTTAGCTGATAGTTGTTTTCCAGTTAATGAGGGCCCCGCAGCAAGCCGGCTTCATGAATTCTTTTTGCACCAATTCTGTGATGCACACAGCTGTACTCCAAGTGGGAAACCTTTCTCCAGAGGGCGCAGGAAGAGGACAAATGTGTTCTACATCGTGGCCTCCATTTTTCTTGTGGTGCTGCTGCTACTTTACTATCTCTACATTTACTTGTATCAAAGAGGAATGAAAAGGGAAACTCAAGTGCTGAAGCGTATCTCACAAGCCAGCAGGAAGAAAAAGCCATCTTAA 855 0.4175 MKKMWILHNRFVVFCIVCYLCSSLQLTRVSSSSPAPHSDHDHINSDVGRTLQQEQDGNHQIHCSRERSRVAWKIIQEYLMPFVEKEKYHISKRCRLHPDNDIYRDQEDHKSHIDINEWQCGFCKKSFYEEKHLDQHFDNRHSNLLNSSESRCLADVCGALHCDLEINSGSKKSKCNPAAAARNKHLCESLADSCFPVNEGPAASRLHEFFLHQFCDAHSCTPSGKPFSRGRRKRTNVFYIVASIFLVVLLLLYYLYIYLYQRGMKRETQVLKRISQASRKKKPS* 285
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1380 284 PANTHER ZINC FINGER PROTEIN-RELATED 10 284 - -
Lja6g1380 284 ProSitePatterns Zinc finger C2H2 type domain signature. 120 141 IPR013087 -
Lja6g1380 284 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 10 284 - -
Lja6g1380 284 ProSiteProfiles Zinc finger C2H2 type domain profile. 118 143 IPR013087 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja6g1380 Lja-Chr6 39161830 39165999 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1380 60 284 C2H2 Transcription Factor Family AT5G63280 62.222 1.68e-104 303