Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1367 ATGTTTCAGAGAAGACAGCAGCAGAAAGAAGCTGATATGCTCAGTGACATGGCCAATTTGTCACAAGCATTCGGTGGCGGTGCCGGTGCTCCACCACCGCCACCTCCTCCTCCTCACGGTGGTCCCTCCTCATCCAACAAGATGGCCGGTGCGGAGCAGCTTGTCCTTGAACTCAGCAACCCTGATCTCCGTGAAAATGCTCTTCTCGAACTCTCCAAGAAAAGGGAGCTGTTTCAAGATCTTGCTCCATTGTTATGGAATTCTTTTGGGACTATTGCTGCACTTTTGCAGGAAATAGTTTCTATATACCCTGTCCTTTCACCACCCACTCTTACTCCAGCGCAATCAAATCGGGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTGGCGTCTCACCCTGATACAAGGATGCAATTCCTCAATGCTCATATCCCTCTGTATCTGTATCCTTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTACCTGAGGCTCACCAGTCTTGGTGTCATTGGTGCATTGGTGAAGGTTGATGATACGGAGGTCATAAGTTTTCTTCTTTCAACTGAGATAATTCCTCTTTGCCTGCGCACCATGGAAATGGGCAGTGAACTGTCAAAAACAGTTGCAACATTTATTGTTCAAAAGATTCTGTTGGATGATGTGGGCTTGGATTATATTTGCACTACAGCAGAGCGTTTTTTCGCAGTAGGTCGAGTTTTAGGGAACATGGTGGGAGCTCTTGCTGAGCAGCAATCAACTCGTCTGCTGAAACATATCATTCGATGCTATCTTCGCCTTTCTGATAATCCAAGGGCTTGTGATGCATTAAGAAGCTGTCTTCCAGACATGTTAAGGGATGCTACTTTCAGCAGTTGCCTTCGTGAGGACACCACAACTAGGAGGTGGCTACAGCAACTGCTTCACAATGTTGGATCAGGTCGGGTCCCTGCAATGCAAGCTGGAGGTTTCGATCATATAATGGTAAACTGA 996 0.4659 MFQRRQQQKEADMLSDMANLSQAFGGGAGAPPPPPPPPHGGPSSSNKMAGAEQLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPTLTPAQSNRVCNALALLQCVASHPDTRMQFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVGALAEQQSTRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDTTTRRWLQQLLHNVGSGRVPAMQAGGFDHIMVN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1367 331 SUPERFAMILY ARM repeat 56 288 IPR016024 -
Lja6g1367 331 MobiDBLite consensus disorder prediction 1 47 - -
Lja6g1367 331 Gene3D - 43 313 IPR011989 -
Lja6g1367 331 PANTHER BNAA05G20110D PROTEIN 17 328 - -
Lja6g1367 331 Pfam Cell differentiation family, Rcd1-like 54 312 - -
Lja6g1367 331 PANTHER UNCHARACTERIZED 17 328 - -
Lja6g1367 331 MobiDBLite consensus disorder prediction 28 42 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Lja6g1367 Rcd1 3.9e-129 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1367 K12606 - pop:7483613 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1367 6 38861389 38866919 Lja6g1367 6 38861389 38866919 PCT