Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1354 ATGGGTAGCTCAGAAGAAAGGGTTCTTCTGGAGGAGCAATTGGAGCTTCAATTGCAGGAGCAAAGGGATTCCCTCTCTGCAATCGATGAAGCTCTTCTCTCTGATCCTACCAACTCCGAGCTCGTTGCGGTTCATGAAGAGCTTGTTCAGGCAATTAAAGATGCAGAGGAAGGGCTTCTTCATCTAAAACGTGCAAGATTATTACAGGAAGTAGATTCTGTGCTGCATAACACTAATATGTTTACTGAAGAAGAGAAAGTGGAGCCCCTTGATCCCACAGATGTAGAACCAGAGCCCCTGGAGGAAAAAAGCTATTCTATTGGATCTAAATGTAGATTCCGTCACAAAGATGGGCGTTGGTACAATGGTCAAGTGGTGCAATTGGATAATTCAGTAGCAAAGATTTCGTTCCTTACTCCTACATCTGAGAATATGCTGATGTGCAAGTTCTTTTTACAACATCGATGTCGATTTGGTGCTAACTGTCGCCAATCGCATGGAGTTGATGTTCAACTGTCCTCCCTCAAGAGATATGTCCCAACAATCTGGAAGCCATCCCTTGTGGGATCAAGTATATGGGCACTCTCAGATGCAAAAACAGGCATTTGGAGAGAAGCTGAGCTTGAGCTCTGGGATGAAAAAGCTGGAGTTGGACAAGTTGTTTTCAGAGACAGTGGAAGTTCTATGAAGCTTTGTGCAGAAGAAATAGTATTATCTGAGTATGCAGAAGTAAGCGACTTAGAGAGTGATTCCAGCTTAGAACAATCCGAGTCCAGTGACTACGATGAAGAGGAATCACAAGGTTTAGGATTTCTAGAGAGTACCAACTTACAGAAAGGTATTCAAACCGACACTGCTTTGTTTGCTAAGTGGGAGAACCACACTAGAGGCATAGCTTCCAAAATGATGGCTAATATGGGTTTCCGAGAAGGAATGGGTTTAGGTGTAACTGGTCAGGGAATGCTTGATCCGATACCTGTGAAGGTTCTGCCACCAAAGCAATCCTTAGATCATGCACTTGATTCTCGTAAAGGGGAAGAGAATAATGAGAAGCAAGGTAAGAAACGGAGCCGAGGTGGTAAGAGAAAACGTGAAAAGAAATTCGCAGAAGCGAATCGCACAGCGAAAGAGGAAGAAGAATCAGCACCAGATGTCTTCACACTAATAAACAATCAACTGGCAATGCATGGTGAAGCTTCCAATGGTGGATCAATGAAGAAGCAGCAAAGTAAAGATTCAGGGGAAGTTAAAAAGGTGGATAGGAAGGTGTTGGTTGCTTATGAGGATGAGGTGAAGGGTTTGAAGATGAGGGTTGCAAAGCTTGAACAAATGGTGAATGCTAACAAAAAGGAGAAGGCTGTTTATGAGGCTGCTATGAGAAAATTAGTTGAAACCCGCAAGGCTTTGGCAGAGGCTGAATCAGTTCATGCCTCAGCCTCAAATACAGTTGTTGGCAAAGAAAAAGAGAAGAGATGGCTTAAGTTTTAG 1488 0.4335 MGSSEERVLLEEQLELQLQEQRDSLSAIDEALLSDPTNSELVAVHEELVQAIKDAEEGLLHLKRARLLQEVDSVLHNTNMFTEEEKVEPLDPTDVEPEPLEEKSYSIGSKCRFRHKDGRWYNGQVVQLDNSVAKISFLTPTSENMLMCKFFLQHRCRFGANCRQSHGVDVQLSSLKRYVPTIWKPSLVGSSIWALSDAKTGIWREAELELWDEKAGVGQVVFRDSGSSMKLCAEEIVLSEYAEVSDLESDSSLEQSESSDYDEEESQGLGFLESTNLQKGIQTDTALFAKWENHTRGIASKMMANMGFREGMGLGVTGQGMLDPIPVKVLPPKQSLDHALDSRKGEENNEKQGKKRSRGGKRKREKKFAEANRTAKEEEESAPDVFTLINNQLAMHGEASNGGSMKKQQSKDSGEVKKVDRKVLVAYEDEVKGLKMRVAKLEQMVNANKKEKAVYEAAMRKLVETRKALAEAESVHASASNTVVGKEKEKRWLKF* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1354 495 SMART G-patch_5 293 339 IPR000467 GO:0003676
Lja6g1354 495 Coils Coil 45 65 - -
Lja6g1354 495 MobiDBLite consensus disorder prediction 339 354 - -
Lja6g1354 495 MobiDBLite consensus disorder prediction 339 381 - -
Lja6g1354 495 MobiDBLite consensus disorder prediction 364 381 - -
Lja6g1354 495 Gene3D - 92 144 - -
Lja6g1354 495 Coils Coil 424 475 - -
Lja6g1354 495 ProSiteProfiles G-patch domain profile. 295 351 IPR000467 GO:0003676
Lja6g1354 495 Coils Coil 11 31 - -
Lja6g1354 495 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22 1 495 - -
Lja6g1354 495 Gene3D - 145 189 - -
Lja6g1354 495 ProSiteProfiles Zinc finger C3H1-type profile. 142 169 IPR000571 GO:0046872
Lja6g1354 495 Coils Coil 361 381 - -
Lja6g1354 495 MobiDBLite consensus disorder prediction 248 267 - -
Lja6g1354 495 Pfam G-patch domain 295 337 IPR000467 GO:0003676
Lja6g1354 495 MobiDBLite consensus disorder prediction 253 267 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lja6g1354 G-patch 3.7e-11 CL0449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1354 - - gmx:100796284 742.651