Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1319 ATGGCGGCTATGGTGGCGGCACTGAACTTGACAGATGGTGAGGCGGCGAGCAATCTTGCTCACGACCATGCACAGGTGGTTCCTATCTCAATCTTCGCCGCTGTTCTCTGCCTCTGTTTGCTATTTGGTCACTTGTTCGAAGGAAATCGATGGCTTAATGAATCCATTGTCGCCATTGTAGTGGGATGCATTGCTGGAATTATACTCTTACTACTTACAAAGGGGAAGAGTTCTCACATCCTTATATTTGATGAAGAATTTTTCTTCTTATATCTCCTTCCTCCCATAATATTCAATGCAGGATTTCAGGTGAAGAAGAAACAGTTCTTTCATAACTTTCTAATCATCATGTTATTTGGGGTGATTGGTGTTTTCATTTCATCTTTAATTATCACAACCGGCAGCTGGTGGATATTCCCCAAGTTGAACTTCCTTGGCTTGACTGTGAGAGATTATCTTGCTATAGGAGTGATTTTCTCATCCACCGACACAGTTTGCACGCTACAGGTTCTCCATCAAGATGAAACACCTTTACTATACAGCATAGTCTTTGGGGAAGGAGTGGTAAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTGCAAAAGATTGATGTTTCAAAGCTTAATGGAAAGACGTTCGGCGTTCTTGGAAATTTCTTGTATCTATTCTCAGCAAGCACTTGCCTTGGAGTTGTAGCTGGACTTCTCACATCATATCTCTTGAAAGCCTTAAGCTTTGGAAGACATTCAAGTGTTCGTGAAGTTGCATTGATGGTGTTAATGGCATACCTATCCTACATGTTGGCAGAGCTACTCGAGCTAAGCGGAATCCTTACTGTTTTCTTTTGTGGAATATTTATGTCACATTATGCATGGCATAATGTTACCGAAACTTCACGAATCACAACGAGATATGTGTTTGCAGCAATGTCGTTTATCGCAGAAACCTTCATATTTCTGTATGTGGGCATGGATGCACTTGACTTGGCGAAGTGGAAGATGACAGAATTGAGTTTTGGAAATTTGATGGGAATTTACAGCAGCTTAATCTTTTTGATATTGCTTGGACGCGCCGCATTTGTTTTCCCTCTCTCTGCGTTTTACAATTATATGAATAGGCGTTCCGAACAAACACCAAGTATCACATTCCAACATCAGATAATCATTTGGTGGGCTGGTCTAATGAGGGGAGCAGTCTCCATTGCTCTGGCTTTCAAACAGTTCACGTATTCTGGGGTTACTTCTGATCCAGTTAATGCAACAATGATTACCAACACTATTATCGTTGTCCTTTTCAGCACGCTGGGGTTTGGTTTTCTCACAAAGCCACTGATTAGATATCTGCTTCCCCACACTACCACAAGGAGAAACATCAGCCGCGAAGAATCCGGTCCACCCGTTGTGGATTTAAACCTACCTTTGCTATCCTTTGAAGAGTCGACAGCAACCAACATCAGCCGCGCAAAGGAGAGTTTGTCCATGTTAATAGAAAGCCCTGTGTACACCATACATTACTATTGGAGGAGGTTTGATGATTCCTACATGAGACCGATATTCGGGGGACCGCGTCGTAACAACTCAGTTTGCTAG 1593 0.4244 MAAMVAALNLTDGEAASNLAHDHAQVVPISIFAAVLCLCLLFGHLFEGNRWLNESIVAIVVGCIAGIILLLLTKGKSSHILIFDEEFFFLYLLPPIIFNAGFQVKKKQFFHNFLIIMLFGVIGVFISSLIITTGSWWIFPKLNFLGLTVRDYLAIGVIFSSTDTVCTLQVLHQDETPLLYSIVFGEGVVNDATSVVLFNAVQKIDVSKLNGKTFGVLGNFLYLFSASTCLGVVAGLLTSYLLKALSFGRHSSVREVALMVLMAYLSYMLAELLELSGILTVFFCGIFMSHYAWHNVTETSRITTRYVFAAMSFIAETFIFLYVGMDALDLAKWKMTELSFGNLMGIYSSLIFLILLGRAAFVFPLSAFYNYMNRRSEQTPSITFQHQIIIWWAGLMRGAVSIALAFKQFTYSGVTSDPVNATMITNTIIVVLFSTLGFGFLTKPLIRYLLPHTTTRRNISREESGPPVVDLNLPLLSFEESTATNISRAKESLSMLIESPVYTIHYYWRRFDDSYMRPIFGGPRRNNSVC* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1319 530 Pfam Sodium/hydrogen exchanger family 31 446 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja6g1319 530 PANTHER SODIUM/HYDROGEN EXCHANGER 17 527 - -
Lja6g1319 530 PANTHER SODIUM/HYDROGEN EXCHANGER 17 527 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lja6g1319 530 PRINTS Na+/H+ exchanger signature 116 124 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lja6g1319 530 PRINTS Na+/H+ exchanger signature 156 166 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lja6g1319 530 PRINTS Na+/H+ exchanger signature 87 98 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lja6g1319 530 PRINTS Na+/H+ exchanger signature 101 115 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lja6g1319 530 Gene3D - 148 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1319 Lja-Chr6 38130936 38136236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1319 17 528 Antiporters AT5G55470 71.760 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1319 - - gmx:100813332 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1319 6 38130936 38136236 Lja6g1319 6 38130936 38136236 ECH