Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1288 ATGCATGCACCAGAGTTATTTTCAGTGACATGTTTATCTTTGGAAAAAAATTCACTACCTCTTATAGGAAATTTACACCAGCTTTTTGCCTCAAAGCTTCCCCATCACACCTTAAGAGACTTGGCCACCAAGTTTGGACCCTTAATGCACCTAAAACTAGGAGAGGTACCTACCATCATAGTTTCTTCTCCAGAAATGGCAAAAGAGGTTATGAAAACACATGATATCATATTTTCAAACAGACCCCAAGTCCTTCTCTCCAGAATTGCTTACAATGCTAAAGATATTGTCTTCTCTCGATATGGGCGCCACTGGAGGCAACTGAGAAAGATATGCACAATAGAGGTGTTAACAGCAAAATGTGTGCAATCTTTCAGGCACATAAGAGAAGAGGAAGTGTCAGCATTCATTGGAACAATATCTTCAAGTGAAGGATCAATTGTGAATCTCAGTGAGAAGATTTTGTCTCTGACATATGGAATAACAGCAAGAGCAGCTATAGGTGACAAATCCATATACCAGCAAGAGTTAATATCAATCATTAAGAAAGCAATAAACCTTGCTGGAAGACCCTGTGTTGCTGATCTCTATCCTTCCATTAAATGGCCGGGCTTCAAAATTTTGGTGGGAGAGTTTGATGGGATACTGGACAATATCATTAATGATCACAAACATAGGATAAACAGCCACTGTGAAGCAAATCAGGAAGATTTGGTTGATGTTCTTCTAAGGTTTCATCAAGAAGAAGACTTGCCATATCCCTTTACTTATAACCATGTTAAAGCGGTCATTCTGGATGTGTTTACTGGTGGAATTGAAACATCATCAGCGGTTGTGGAATGGGCAATGTCAGAAATGGTGAAAGCCCCAAAGGTGATGGAACAAGCACAAGCAGAGGTGAGAAGGGTTTTTGAGACCATAAGGCTACACCCACCTGCACCATTGTTAATTCCTAGAGTAAACAAGAAAATGTGTGAAATCAATGGATATGAAATACCTGCTAAGACCATGAGATTCATGCCAGAGAGATTTTTTGAAAGCTCAGTAGATTACAAAGGTACAGACTTTGAGTTCATCCCATTTGGTGCTGGAAGGAGGATGTGCCCTGGCATTGTATTTGCCATGGCTAACATTGAGCTTCCACTTGCTCAGTTGCTTTACCATTTTGATTGGAAGCTTCCCAGTGGAATCAAGCATGGAGAACTAGACATGACTGAGTCATGTGGGTTAACTGCAAGAAGAAAAAATGGACTGTGTTTGATTCCTATTAAGTATTAA 1278 0.3998 MHAPELFSVTCLSLEKNSLPLIGNLHQLFASKLPHHTLRDLATKFGPLMHLKLGEVPTIIVSSPEMAKEVMKTHDIIFSNRPQVLLSRIAYNAKDIVFSRYGRHWRQLRKICTIEVLTAKCVQSFRHIREEEVSAFIGTISSSEGSIVNLSEKILSLTYGITARAAIGDKSIYQQELISIIKKAINLAGRPCVADLYPSIKWPGFKILVGEFDGILDNIINDHKHRINSHCEANQEDLVDVLLRFHQEEDLPYPFTYNHVKAVILDVFTGGIETSSAVVEWAMSEMVKAPKVMEQAQAEVRRVFETIRLHPPAPLLIPRVNKKMCEINGYEIPAKTMRFMPERFFESSVDYKGTDFEFIPFGAGRRMCPGIVFAMANIELPLAQLLYHFDWKLPSGIKHGELDMTESCGLTARRKNGLCLIPIKY* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1288 425 Gene3D Cytochrome P450 13 419 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 PANTHER CYTOCHROME P450 71D10 17 424 - -
Lja6g1288 425 Pfam Cytochrome P450 17 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 Pfam Cytochrome P450 338 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 Pfam Cytochrome P450 305 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 SUPERFAMILY Cytochrome P450 19 422 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 PRINTS P450 superfamily signature 270 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 PRINTS P450 superfamily signature 359 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 PRINTS P450 superfamily signature 301 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 361 370 IPR017972 GO:0005506|GO:0016705
Lja6g1288 425 PRINTS E-class P450 group I signature 42 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 PRINTS E-class P450 group I signature 358 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 PRINTS E-class P450 group I signature 368 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 PRINTS E-class P450 group I signature 259 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 PRINTS E-class P450 group I signature 66 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 PRINTS E-class P450 group I signature 279 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1288 425 PANTHER CYTOCHROME P450 71B11-RELATED 17 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1288 Lja-Chr6 37658450 37660439 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1288 18 425 Cytochrome P450 AT3G26330 39.309 1.44e-106 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1288 - K23806 csin:114319007 466.848