Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1286 ATGGAGTTGGGCCTCCAGAATATCCCCTCACCTGCAATCTTACCCTTCTTCCTCTTCTTGTTCATAGTGCTTGGCATAGTTTGGAGATCCAAAACCAAGCCTTCAAGTTCCAAGTTGCCACCAGGACCACCAAAACTTCCTCTTATAGGGAACATGCACCAGCTTGGTGCCATGCCTCATCATGGCCTAGCAAAATTGGCACAGCAATATGGGCCACTGATGCACATAAAACTTGGTGGACTTTCCTTCATAGTGGTGTCTTCCCCTGAAATGGCCAAAGAAGTGATGAAGACACATGACATCATCTTTGCAAATAGGCCTCATTTTATTGCTGCAGATGTTATAACTTATGGTTCTAGAGGCATCACCTTTGGCCCTTATGGAAGTTACTGGAGGCAGATGAGAAAGATTTGCACTTTTGAACTTCTAACTCCAAAGCGAGTAGAATCATTTCAATCAATTAGAGAACATGAAGCATCAAATCTTGTCAAAGAGATAGGTTTGAGTGAAGGGTCAAGTATCAATCTCAGTAAGGTGATCAACTCATTCTCCTATGGCTTAACATCAAGAGTAGCCTTAGGAGGAAAATCCGAAGATCAAGAAGCATTCATAGCTGTTATGAAGGATGTCACAAAGCTAGTTTCTGGCTTTTCTATAGCTGACCTTTATCCTTCCATTGAAGTGCTTCAGGTTTTGACCGGAATAAAGTCCAGAGCTGAGAAGCTTCATAAGGAATTAGATAGGATTCTTGAAAAAATTGTCAGAGATCACAGGGAGACAAGTTCAGAAACAAAGGCAATCAATGAAAAAGCAGGTGAAGAAGACCTAGTTGATGTCCTGCTAAGGCTTCAGAAGCAGAACAACCTTGAGCATCCTATATCTGACAGCACTATCAAAGCAAACATGTTGGATATGTTCAGTGCCGGAAGCGGTACTGCAGCCAGAACCTCAGAGTGGGCAATGTCAGAACTTGTAAAAAATCCAAGGGTGATGGAAAGAGCACAAGCTGAGGTAAGAAGGGTCTTTGATGGAGTAGGGCATGTAGATGAAGCTAAATTCCATGAATTGAAATACTTAAAGTCAGTAATCAAGGAAACACTTCGTCTACATGCTCCTGTTCCATTGTTACTTCCAAGGGAGTGCAGTGAGAGATGTGAAATTAATGGATATGAGATACCTGCCAATAGCAAGGTTATTGTTAATGCATGGTCAATATGCAGAGATCCAAACTATTGGATTGAATCTGAGAAATTTTACCCTGAGAGATTCCTTGATAACCCAGTTGATTACAAAGGTGCAGATTTTCAGTTTATCCCATTTGGTGCTGGAAGAAGGATGTGTCCTGGCGCTACATTTGGCACTGCTAATGTTGAAATATTGCTAGCAAATTTGCTTTTCCACTTTGATTGGAAGATGCCTAATGGGAATAAGCCTGAAGAACTTGACATGACTGAATCATTTGGCTTGTCTGTAAGAAGAAAACATGATTTGTACATGATTCCTATAATGCATCACTCATCTGCAAATTAA 1530 0.4105 MELGLQNIPSPAILPFFLFLFIVLGIVWRSKTKPSSSKLPPGPPKLPLIGNMHQLGAMPHHGLAKLAQQYGPLMHIKLGGLSFIVVSSPEMAKEVMKTHDIIFANRPHFIAADVITYGSRGITFGPYGSYWRQMRKICTFELLTPKRVESFQSIREHEASNLVKEIGLSEGSSINLSKVINSFSYGLTSRVALGGKSEDQEAFIAVMKDVTKLVSGFSIADLYPSIEVLQVLTGIKSRAEKLHKELDRILEKIVRDHRETSSETKAINEKAGEEDLVDVLLRLQKQNNLEHPISDSTIKANMLDMFSAGSGTAARTSEWAMSELVKNPRVMERAQAEVRRVFDGVGHVDEAKFHELKYLKSVIKETLRLHAPVPLLLPRECSERCEINGYEIPANSKVIVNAWSICRDPNYWIESEKFYPERFLDNPVDYKGADFQFIPFGAGRRMCPGATFGTANVEILLANLLFHFDWKMPNGNKPEELDMTESFGLSVRRKHDLYMIPIMHHSSAN* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1286 509 Coils Coil 232 252 - -
Lja6g1286 509 SUPERFAMILY Cytochrome P450 38 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1286 509 Gene3D Cytochrome P450 26 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1286 509 Pfam Cytochrome P450 40 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1286 509 PANTHER CYTOCHROME P450 71B11-RELATED 9 505 - -
Lja6g1286 509 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 505 - -
Lja6g1286 509 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1286 509 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1286 509 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1286 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Lja6g1286 509 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1286 509 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1286 509 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1286 509 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1286 509 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1286 509 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1286 509 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1286 509 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1286 Lja-Chr6 37625913 37628114 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1286 17 501 Cytochrome P450 AT3G26300 39.879 1.20e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1286 - - gmx:100818000 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1286 6 37625913 37628114 Lja6g1286 6 37625913 37628114 ECH
Lja6g1286 6 37625913 37628114 Lja6g1277 6 37132636 37152697 PCT