LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja6g1286	ATGGAGTTGGGCCTCCAGAATATCCCCTCACCTGCAATCTTACCCTTCTTCCTCTTCTTGTTCATAGTGCTTGGCATAGTTTGGAGATCCAAAACCAAGCCTTCAAGTTCCAAGTTGCCACCAGGACCACCAAAACTTCCTCTTATAGGGAACATGCACCAGCTTGGTGCCATGCCTCATCATGGCCTAGCAAAATTGGCACAGCAATATGGGCCACTGATGCACATAAAACTTGGTGGACTTTCCTTCATAGTGGTGTCTTCCCCTGAAATGGCCAAAGAAGTGATGAAGACACATGACATCATCTTTGCAAATAGGCCTCATTTTATTGCTGCAGATGTTATAACTTATGGTTCTAGAGGCATCACCTTTGGCCCTTATGGAAGTTACTGGAGGCAGATGAGAAAGATTTGCACTTTTGAACTTCTAACTCCAAAGCGAGTAGAATCATTTCAATCAATTAGAGAACATGAAGCATCAAATCTTGTCAAAGAGATAGGTTTGAGTGAAGGGTCAAGTATCAATCTCAGTAAGGTGATCAACTCATTCTCCTATGGCTTAACATCAAGAGTAGCCTTAGGAGGAAAATCCGAAGATCAAGAAGCATTCATAGCTGTTATGAAGGATGTCACAAAGCTAGTTTCTGGCTTTTCTATAGCTGACCTTTATCCTTCCATTGAAGTGCTTCAGGTTTTGACCGGAATAAAGTCCAGAGCTGAGAAGCTTCATAAGGAATTAGATAGGATTCTTGAAAAAATTGTCAGAGATCACAGGGAGACAAGTTCAGAAACAAAGGCAATCAATGAAAAAGCAGGTGAAGAAGACCTAGTTGATGTCCTGCTAAGGCTTCAGAAGCAGAACAACCTTGAGCATCCTATATCTGACAGCACTATCAAAGCAAACATGTTGGATATGTTCAGTGCCGGAAGCGGTACTGCAGCCAGAACCTCAGAGTGGGCAATGTCAGAACTTGTAAAAAATCCAAGGGTGATGGAAAGAGCACAAGCTGAGGTAAGAAGGGTCTTTGATGGAGTAGGGCATGTAGATGAAGCTAAATTCCATGAATTGAAATACTTAAAGTCAGTAATCAAGGAAACACTTCGTCTACATGCTCCTGTTCCATTGTTACTTCCAAGGGAGTGCAGTGAGAGATGTGAAATTAATGGATATGAGATACCTGCCAATAGCAAGGTTATTGTTAATGCATGGTCAATATGCAGAGATCCAAACTATTGGATTGAATCTGAGAAATTTTACCCTGAGAGATTCCTTGATAACCCAGTTGATTACAAAGGTGCAGATTTTCAGTTTATCCCATTTGGTGCTGGAAGAAGGATGTGTCCTGGCGCTACATTTGGCACTGCTAATGTTGAAATATTGCTAGCAAATTTGCTTTTCCACTTTGATTGGAAGATGCCTAATGGGAATAAGCCTGAAGAACTTGACATGACTGAATCATTTGGCTTGTCTGTAAGAAGAAAACATGATTTGTACATGATTCCTATAATGCATCACTCATCTGCAAATTAA	1530	0.4105	MELGLQNIPSPAILPFFLFLFIVLGIVWRSKTKPSSSKLPPGPPKLPLIGNMHQLGAMPHHGLAKLAQQYGPLMHIKLGGLSFIVVSSPEMAKEVMKTHDIIFANRPHFIAADVITYGSRGITFGPYGSYWRQMRKICTFELLTPKRVESFQSIREHEASNLVKEIGLSEGSSINLSKVINSFSYGLTSRVALGGKSEDQEAFIAVMKDVTKLVSGFSIADLYPSIEVLQVLTGIKSRAEKLHKELDRILEKIVRDHRETSSETKAINEKAGEEDLVDVLLRLQKQNNLEHPISDSTIKANMLDMFSAGSGTAARTSEWAMSELVKNPRVMERAQAEVRRVFDGVGHVDEAKFHELKYLKSVIKETLRLHAPVPLLLPRECSERCEINGYEIPANSKVIVNAWSICRDPNYWIESEKFYPERFLDNPVDYKGADFQFIPFGAGRRMCPGATFGTANVEILLANLLFHFDWKMPNGNKPEELDMTESFGLSVRRKHDLYMIPIMHHSSAN*	510

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lja6g1286	509	Coils	Coil	232	252	-	-
Lja6g1286	509	SUPERFAMILY	Cytochrome P450	38	501	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Lja6g1286	509	Gene3D	Cytochrome P450	26	503	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Lja6g1286	509	Pfam	Cytochrome P450	40	489	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Lja6g1286	509	PANTHER	CYTOCHROME P450 71B11-RELATED	9	505	-	-
Lja6g1286	509	PANTHER	CYTOCHROME P450 FAMILY 71 PROTEIN	9	505	-	-
Lja6g1286	509	PRINTS	P450 superfamily signature	438	447	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Lja6g1286	509	PRINTS	P450 superfamily signature	308	325	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Lja6g1286	509	PRINTS	P450 superfamily signature	361	372	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Lja6g1286	509	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	440	449	IPR017972	GO:0005506\|GO:0016705

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja6g1286	Lja-Chr6	37625913	37628114	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja6g1286	17	501	Cytochrome P450	AT3G26300	39.879	1.20e-134	397

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja6g1286	-		-	gmx:100818000	791.186

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja6g1286	6	37625913	37628114	Lja6g1286	6	37625913	37628114	ECH
	Lja6g1286	6	37625913	37628114	Lja6g1277	6	37132636	37152697	PCT

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