Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1281 ATGGCTCCTCAAATTCAAGATCACTTGTTAGCCCTTTTCACTTTTTTCCTATCCATGATTGTTGCAATCATGATGATCAGGAAGAATACCAGAAAAACACTCACACCTACATATATACCACCAGGGCCATGGAAGCTACCTATCATAGGAAATATTCCCCATCTTGTTACATCTTTGCCACATAGAAAATTACGAGACCTGGCCTTAACATATGGACCCTTGATGCATTTGCAACTCGGGGAGCTCTTCATCATTGTTGTTTCCTCAGCAGAGTATGCTAGGGAGGTAATGAAAACTCATGATGTTACCTTTGCATCAAGGCCTTATCTTCTAGCCTCCGATATAGCTTCTTATAACTCCACCAATATAGCTTTCTCACCTTATGGTTATTATTGGAGACAACTTCGGAAGATATGTGCTACAGAGCTTTTAAGCTCAAAACGGGTCAAATCTCTTTGGCCAATCAGAGAGGAAGAGATCACTACTCTCATTAAATGGATTGCTTCAAAAGAAGGATTAGAAATCAATCTTACTCAAGCAGTTGAGTCAATCATCTACACAATCACTTCAAAGGCTGCATTTGGCAAGAAATATGAAGAACAAGAAGAGTTCGTAACAGCGGCAAAACAATTGATGAAGCTTGGAGGAGGTTTCAGCATAGGAGACTTGTTTCCTTCAGCTAAATGGCTTCAAAGTATTTCTGGCATGAGGCCGAAGCTTGAGAAGATGCACCAAATTGTAGACAAGATTTTGGAGAATATCATCAATGACCATAAAGAGACAAGGTCAAGAGAAAAAGAAGCATTGAATGAAGCAGAGGAAGATTTGATTGATGTTCTCTTAAAATTTGAGGATAGGAACAATGACATGGGTTTTCGCTTAACTTCAAACAATATCAAGGCTATAATCTTGGATATCTTCAGCGCTGGGAGTGAGACGGCAGGATCTACCATTGATTGGGTGATGGCCGAGATGATAAAGAATCCAAGAATATTGAAGAAAGCACAAGTTGAAGTGAGAGAGGTATGTGGTAAGAGAGGAAAGGTTGATGAAAGTGCCATTGCGGAGCTCAAATACTTGAAAGCAGTCATCAAAGAGGTCCTCAGGTTACACCCTCCTGGCCCTCTTCTTCTTCCAAGGGAATGTAGAGAAGCATGTGAGATTAATGGATTTAATATACCTGTTAAAAGCAAGGTCATTGTCAATGCTTGGGCAATTGGAAGGGATCCAAAATATTGGACTGAGCCAGATAAGTTTTATCCTGAAAGGTTTATTGATAGCTCTATTGACTACAAAGGAACTAATTTTGAGTATATCCCATTTGGTGCTGGAAGGAGAATTTGCCCAGGCATAAATTATGGTATGGCCAATGTTGAGGAGGTCCTTGCATTCTTATTGTTTCATTTTGATTGGAGGCTACCCAATGGAATTAAAAATGAGGACTTAGACTTGACAGAGGAATTTGGAGTTTCCGTGGCAAGAAAATGTGATCTATATTTGATTCCCACAGTTTCTTCTCCCTTGGCTATAACTTAG 1536 0.3978 MAPQIQDHLLALFTFFLSMIVAIMMIRKNTRKTLTPTYIPPGPWKLPIIGNIPHLVTSLPHRKLRDLALTYGPLMHLQLGELFIIVVSSAEYAREVMKTHDVTFASRPYLLASDIASYNSTNIAFSPYGYYWRQLRKICATELLSSKRVKSLWPIREEEITTLIKWIASKEGLEINLTQAVESIIYTITSKAAFGKKYEEQEEFVTAAKQLMKLGGGFSIGDLFPSAKWLQSISGMRPKLEKMHQIVDKILENIINDHKETRSREKEALNEAEEDLIDVLLKFEDRNNDMGFRLTSNNIKAIILDIFSAGSETAGSTIDWVMAEMIKNPRILKKAQVEVREVCGKRGKVDESAIAELKYLKAVIKEVLRLHPPGPLLLPRECREACEINGFNIPVKSKVIVNAWAIGRDPKYWTEPDKFYPERFIDSSIDYKGTNFEYIPFGAGRRICPGINYGMANVEEVLAFLLFHFDWRLPNGIKNEDLDLTEEFGVSVARKCDLYLIPTVSSPLAIT* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1281 511 Pfam Cytochrome P450 40 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 SUPERFAMILY Cytochrome P450 40 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 Gene3D Cytochrome P450 35 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Lja6g1281 511 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 12 506 - -
Lja6g1281 511 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1281 511 Coils Coil 251 275 - -
Lja6g1281 511 PANTHER CYTOCHROME P450 71B11-RELATED 12 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1281 Lja-Chr6 37350707 37352748 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1281 8 506 Cytochrome P450 AT5G25140 41.502 8.73e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1281 - - mtr:MTR_3g058060 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1281 6 37350707 37352748 Lja6g1281 6 37350707 37352748 ECH
Lja6g1277 6 37132636 37152697 Lja6g1281 6 37350707 37352748 PCT