Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1278 ATGGCTCCTCAAATTCATGAGTTGTTAACCCTTTTGAGTTTTTTCCTATCCATGATTCTTGCACTTATTATGGTAAGGAAGAATCTAAGAAAAATTAACTCAATTCCAAATATACCTCCAGGTCCATGGAAGCTACCTATCATAGGAAACATACCCCATCTTGTTACATCTATGCCACATCGAAAATTAAGAGATCTGGCCATAAAATATGGACCCTTGATGCATCTGCAACTTGGGGAAATCTTCACCATTGTTGTTTCCTCAGCAGAGTGTGCTAGGGAGGTGATGAAAACCCATGATATTATATTTGCTTCAAGGCCTCATCTTCTAGCCACAGATATTCTGTTATATGATTCCACAGACATAGCCTTTTCATCTTATGGTGATTATTGGAGGCATCTTAGGAAGATCTGTGCCACCGAGCTTTTAAGTTTAAGACGGGTGAAATCTCTTTGGTCAATCAGAGAGAAAGAGATCACTACTCTCATCAAATGGATTGCTTCAAAAGAAGAATCAGAGATCAATATTACTGACGCAGTTCTTTCAATCTTGTACACAAGCTTTTCAAAGGCTGCATTTGGCAAGAAATATGAGGACAAAGAAGAGTTCTTATCAGCGATAAACCAAATTCCAAAGCTTGCAGGGGGTTTCTACCTAGCAGACTTGTTTCCTTCAGCTAAATGGCTTCAAAACATTTCTGGGATGAGGCCTAAGCTTGAGAAGATGCACCAAAGACTGGACAGGATTTTGGAGAATATCGTTAATGACCATAGAGATGCAAGGTCAAGAGCTAAAGAAGCTTTGGTTGAAGCAAAGGGAGATCTAATTGATGTTCTCTTAAATTTTGAGGATAGTGGCACCGACTTGGATTTTCATTTAACTTCAAATAATATCAAGGCGATAATCATGGATGTCTTCGTTGCTGGGACTGAGACTATAGCAACAGCCATTAATTGGGCAATAGCTGAGATGATGAAGCATCCAAGAGTACTGAACAAAGCACAAGTTGAAGTGCGGAAGGTGTTTTATAGGAGACGAAAGGTTGATGAAACTGGCATTGATGAGCTAAAATATTTGAAATTAGTCATCAAAGAGGCCCTAAGATTACACCCTCCTGCTCCTCTTCTTGTTCCAAGGGAATGCAGAGAAGCCTGTGAGATCAATGGCTACAATATACCTGTTAAAAGCAGGATCTTGGTCAATGTTTGGGCAATTGGAAGGGATCCAAAATATTGGGCTGAACCAGATAGGTTTTATCCTGAAAGGTTTATTGATAGCTCCATTGACTACACAGGAAATTCTTTTGAGTATATCCCATTTGGTGCGGGAAGGAGAATTTGCCCAGGCATGAACTATGGTATGGCAAATGTTGAGCAGATCCTTGCGTTCTTATTGTATCATTTTGATTGGAGGCTACCCAATGGGATGAAAAACGAGGACTTAGACTTGACAGAGGAGTTTGGAGGTACTATGAAAAGAAAATGTGATCTATACTTGATTCCCACAATTACTCATCCTTTGCCTGGAATTTAG 1533 0.3973 MAPQIHELLTLLSFFLSMILALIMVRKNLRKINSIPNIPPGPWKLPIIGNIPHLVTSMPHRKLRDLAIKYGPLMHLQLGEIFTIVVSSAECAREVMKTHDIIFASRPHLLATDILLYDSTDIAFSSYGDYWRHLRKICATELLSLRRVKSLWSIREKEITTLIKWIASKEESEINITDAVLSILYTSFSKAAFGKKYEDKEEFLSAINQIPKLAGGFYLADLFPSAKWLQNISGMRPKLEKMHQRLDRILENIVNDHRDARSRAKEALVEAKGDLIDVLLNFEDSGTDLDFHLTSNNIKAIIMDVFVAGTETIATAINWAIAEMMKHPRVLNKAQVEVRKVFYRRRKVDETGIDELKYLKLVIKEALRLHPPAPLLVPRECREACEINGYNIPVKSRILVNVWAIGRDPKYWAEPDRFYPERFIDSSIDYTGNSFEYIPFGAGRRICPGMNYGMANVEQILAFLLYHFDWRLPNGMKNEDLDLTEEFGGTMKRKCDLYLIPTITHPLPGI* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1278 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1278 510 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1278 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1278 510 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 505 - -
Lja6g1278 510 PANTHER CYTOCHROME P450 71B11-RELATED 13 505 - -
Lja6g1278 510 Pfam Cytochrome P450 39 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1278 510 SUPERFAMILY Cytochrome P450 39 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1278 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1278 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1278 510 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1278 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1278 510 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1278 510 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1278 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1278 510 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1278 510 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1278 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Lja6g1278 510 Gene3D Cytochrome P450 33 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1278 Lja-Chr6 37153946 37157187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1278 8 502 Cytochrome P450 AT3G26300 40.557 3.94e-129 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1278 - - gmx:100801936 678.322