Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1277 ATGGCTCCTCAAATTCATGACTGGTTAGCCCTTTTCACTTTTTTCCTATCCATGATTGTTGCAATCATGATCATAAGGAAGAATTTAAAAGAAAAACACACAACTTCAAATGTACTCCCAGGTCCATGGAAGCTACCTATCATAGGAAATATTCCCCATCTTGTTACATCTCTGCCACATCGAAAATTAACGGACTTGGCCACAACATATGGACCCTTGATGCATCTTCAACTTGGGGAGATCTTCACCATTGTCGTTTCCTCAGCAGAGTGTGCGATGGAGGTAATGAAAACCCATGATATTATCTTTGCTTCAAGGCCTCATCTTCTAGCCACTGATATAGCTACATATGATTCCACAGACATAGCTTTTTCACCTTATGGTGATTATTGGAGGCAGCTTCGGAAGATCTGTGCCATAGAGCTTTTAAGCACCAAGCGGGTAAGATCTCTTTGGCCAGTCAGAGAGAAAGAGATCACTACTCTTATTAAATGGATTGCTTCAAAAGAAGGATCAGAAATCAATCTGACTCAAGCAGTTCTTTCAGTTATGTATACATTCACTTCAAAAGCTGCATTTGGCAAGAAATATGAGGAACAAGAAGAGTTCATATCAGTGGTAAAACAACTTATGAAGCTTGCAGGAGGTTTCAACTTAGGAGACTTGTTTCCTTCAGCTAAATGGCTTCAAAACCTTTCTGGGATGAGGCCTAAGCTTGAGAAGTTGCACCAAATTCTAGACAGGATTTTGGATAGTATCATGTATGACCATAGAGAAGCAACGTTAAGAGATACACAAGCTTTGGTTGATGCAGAGGAAGATCTGATTGATGTTCTCTTAAAATTTGAGGACAGTATCACTGACTTGGATTTTAGCTTAACTTCAAATAATTTCAAGGCTATAATCATGGAGCTCTTCATTGGAGGGAGTGATACTGCATCAGGTACTATTAATTGGGCAATGGCTGAGATGATTAAGAATACAGAAGTATTGAAGAGAGCACAAGTTGAAGTGAGAGAAGTATTTGGGAAGAGAGGAAAGGTTGATGAAAATGGCATTGAGGATCTCAAATACTTGAAAGCAATCATCAAAGAGGTTCTTAGATTACACCCTATTGCTCCTCTTCTACTTCCAAGGGAATGTGGAGAAGCATGTGAGATTAATGGATATACCATACCCGTTAAAAGCAGGGTCATTGTCAATGCTTGGGCAATTGGACGAGATCCAAAATATTGGACTAATCCAGATAAGTTTTACCCTGAAAGGTTTATTGATAGCTCAATTGACTACAAAGGAACTGATTTTGAGTATATCCCATTTGGCGCTGGAAGGAGAATTTGCCCAGGCTTGAACTTAGGCATGGCAAATGTTGAGCAAGTCCTTGCATTTTTATTGTATCATTTTGATTGGAGGCTATCCAATGGAGTGAAAAATAAGGACTTAGACATGACAGAGGAATTTGGAGTTGCTGTGTCAAGAAAAGATGATCTATACTTGATTCCCACAATTTCTCAAGCTTTTCCTACAAAATGTGGTAGGTGGATTAATGGGGGTGCGTCTTTGGTTGCATACTTGCTGAACTTGCTTCGTTATTTTGATGACTGA 1605 0.3931 MAPQIHDWLALFTFFLSMIVAIMIIRKNLKEKHTTSNVLPGPWKLPIIGNIPHLVTSLPHRKLTDLATTYGPLMHLQLGEIFTIVVSSAECAMEVMKTHDIIFASRPHLLATDIATYDSTDIAFSPYGDYWRQLRKICAIELLSTKRVRSLWPVREKEITTLIKWIASKEGSEINLTQAVLSVMYTFTSKAAFGKKYEEQEEFISVVKQLMKLAGGFNLGDLFPSAKWLQNLSGMRPKLEKLHQILDRILDSIMYDHREATLRDTQALVDAEEDLIDVLLKFEDSITDLDFSLTSNNFKAIIMELFIGGSDTASGTINWAMAEMIKNTEVLKRAQVEVREVFGKRGKVDENGIEDLKYLKAIIKEVLRLHPIAPLLLPRECGEACEINGYTIPVKSRVIVNAWAIGRDPKYWTNPDKFYPERFIDSSIDYKGTDFEYIPFGAGRRICPGLNLGMANVEQVLAFLLYHFDWRLSNGVKNKDLDMTEEFGVAVSRKDDLYLIPTISQAFPTKCGRWINGGASLVAYLLNLLRYFDD* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1277 534 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 10 505 - -
Lja6g1277 534 PANTHER CYTOCHROME P450 71B11-RELATED 10 505 - -
Lja6g1277 534 Pfam Cytochrome P450 40 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 SUPERFAMILY Cytochrome P450 40 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 Gene3D Cytochrome P450 31 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1277 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1277 Lja-Chr6 37132636 37152697 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1277 6 512 Cytochrome P450 AT3G26310 39.612 4.98e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1277 - - mtr:MTR_3g058060 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1277 6 37132636 37152697 Lja6g1277 6 37132636 37152697 ECH
Lja6g1286 6 37625913 37628114 Lja6g1277 6 37132636 37152697 PCT
Lja6g1277 6 37132636 37152697 Lja6g1281 6 37350707 37352748 PCT