Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1275 ATGGCTACACTAATCCTCTACTTGTCAGGTCTTTTCTCCTTTGTCCTCTTAACCCTTATAGTGCAGAAAATAGGCAAGAACCCGAAAAAAACTGACTCAACTTATAACTTTCCCCAAGGGCCTAGGAAGCTACCCTTTATAGGAAACATACACAATCTTATAAGCTCTCAACCCCATAGAAATTTAAGAGACTTGGCCAGAAAATATGGACCCTTGATGCACCTTCAACTTGGAGAGGTTTCTACTATTGTCATTTCCTCACCAGAGTGTGCTAAGGAAGTGATGAAAACCCATGACATTAACTTTGCAAAAAGACCAAAAATCCTAGCTGCAGAAATAATGTCTTACAATTCCACAGGCATAGCTTTTGCTCCTTATGGTGATTATTGGAGACAGCTAAGGAAGATTTGCAACTTGGAGCTTCTAAGCCTAAAACGTGTGAACTCATTCCAGCACATTAGAGAAGAAGTGTTCTCCAATCTTGTGAAACGGATTGATTCAGAGATAGGATCGCCAATCAACCTTACTGAAGCAGTAATTTCATCAATATACACAATTGTTTCAATGTCTGCCTTTGGCAAGAAATGCAAAGACCAAGAGAGTTTTATATCAGTGTTAAAAGAATCAATTAAGATTTCGGCAGGTTTTGACTTAGGAGATTTGTTTCCTTCTTCTCCATGGCTTCAACTTTTTACTGGTTTGAGGCCTAAGTTTTTGAGATTGCATCATAAAACTGATAAGATATTAGAAGACATCATCAATGAGCACAAAGAGGCAAAGTCAGAAGCCAAAGATGAACAAGGTGAAGCAGAGGAAGATTTGGTAGATATTCTCCTAAAATTTGAGGATGGTGGTAACAACAAGGATTTTTCCTTAACTAAAAACAATATAAAGGCCGTGATTTTGGACATATTTAGTGCTGGAGGTGAGACATCAGCTATGACAGTAGATTGGGCAATGGCAGAAATGGTAAGGGATCCAAGAGTAATGAAGAAAGCACAAGCTGAGGTGAGAGAGGTTTTCAATATGAAAGGGAAGGTTGATGAACATTGTACCAATGAGCTCAAATATTTGAAGTCAGTTATCAAAGAGACCCTGAGGTTGCACCCTCCAGCACCTCTTTTGCTTCCAAGAGAATGCGGTCAAGCATGTGAGATACATGGTTATCACATACCAGCCAAAAGTAAAGTCATAGTCAATGCTTGGGCAATTGGAAGAGATTCAAACTATTGGACTGAACCAGAGAGGTTTTATCCTGAGAGATTCATTGATAGCACTATTGATTACAAAGGGAATGATTTTGAGTACATTCCTTTTGGTGCTGGAAGAAGAATATGCCCAGGTAGCACATTTGGTCTGAGAAGTATTGAGTTGGGCCTTTCAATGTTGTTGTATCATTTTGATTGGAAGCTTCCCGGTGGAATCAGAAGTGAAGAATTGGACATGACTGAGGAATTTGGAGTCACAGTAAGAAGAAAACAAGATCTGTTATTGATTCCTTTTGCTTATCATCCTTTGCATGTCACAGGAGTTTCACAAGAAGAAACTTGA 1551 0.3901 MATLILYLSGLFSFVLLTLIVQKIGKNPKKTDSTYNFPQGPRKLPFIGNIHNLISSQPHRNLRDLARKYGPLMHLQLGEVSTIVISSPECAKEVMKTHDINFAKRPKILAAEIMSYNSTGIAFAPYGDYWRQLRKICNLELLSLKRVNSFQHIREEVFSNLVKRIDSEIGSPINLTEAVISSIYTIVSMSAFGKKCKDQESFISVLKESIKISAGFDLGDLFPSSPWLQLFTGLRPKFLRLHHKTDKILEDIINEHKEAKSEAKDEQGEAEEDLVDILLKFEDGGNNKDFSLTKNNIKAVILDIFSAGGETSAMTVDWAMAEMVRDPRVMKKAQAEVREVFNMKGKVDEHCTNELKYLKSVIKETLRLHPPAPLLLPRECGQACEIHGYHIPAKSKVIVNAWAIGRDSNYWTEPERFYPERFIDSTIDYKGNDFEYIPFGAGRRICPGSTFGLRSIELGLSMLLYHFDWKLPGGIRSEELDMTEEFGVTVRRKQDLLLIPFAYHPLHVTGVSQEET* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1275 516 Gene3D Cytochrome P450 28 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1275 516 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1275 516 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1275 516 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1275 516 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 506 - -
Lja6g1275 516 Pfam Cytochrome P450 38 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1275 516 SUPERFAMILY Cytochrome P450 38 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1275 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Lja6g1275 516 Coils Coil 249 273 - -
Lja6g1275 516 PANTHER CYTOCHROME P450 71B11-RELATED 8 506 - -
Lja6g1275 516 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1275 516 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1275 516 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1275 516 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1275 516 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1275 516 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1275 516 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1275 516 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1275 516 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1275 Lja-Chr6 37097747 37099893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1275 6 500 Cytochrome P450 AT3G26310 41.304 9.40e-135 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1275 - - gmx:100778572 790.03