Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1268 ATGTCGTATTTGAACAGCTCCGATTCGAGCGGGATGGTGGTTTCCGGCGGCGGCGGAAGGCAACCGGCGACGCAGCTCTGCGGGATGGATCGGGAGGCAAGGGTTCTGAGATACAGGGAGAAGAGGAAGAACCGGAAATTTGAGAAAACCATCTTCCATCCCGTAAGAACGGTATTTTTTACATGTAGGCTCGGTCTCTCACAGGTTTTTTTATTTTTTAAATTTTTGTTTCGTTTCAGTTTTGTTTATTTACTGAGTTGGGGAATTAATTATGATCTCATGAGTGGTTATGCAAACAAACGGAGACAAGGGATTTTTTGGAGGGTTCGAATCAGAGTAGGGAAGGTGGTCTGCTCCGTTTGGAAGATGGCTGAGGTTTGGCACCGGACATTGTTCCTTAAATGGTGGCTGCTGGCTGGGTGCTCATACTCGATTTGGGTTTTCCTGCAAATTTTCAGATTTGGTGCACCTATGCTGGGATTATGGGGTTCCAGTTTGTGCATTGGTGTCGTTCTTCTACGTTGTTCTTGA 531 0.4633 MSYLNSSDSSGMVVSGGGGRQPATQLCGMDREARVLRYREKRKNRKFEKTIFHPVRTVFFTCRLGLSQVFLFFKFLFRFSFVYLLSWGINYDLMSGYANKRRQGIFWRVRIRVGKVVCSVWKMAEVWHRTLFLKWWLLAGCSYSIWVFLQIFRFGAPMLGLWGSSLCIGVVLLRCS* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1268 176 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1268 Lja-Chr6 36871239 36872776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1268 5 63 C2C2-CO-like Transcription Factor Family AT5G57660 54.237 5.65e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1268 - - lja:Lj1g3v1205680.1 177.563