Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1262 ATGGCTCTCCCTCGCCGCATCCTCTTCTTCTCTGTTCTCTTCCTTTTCCTCTTCCTCTCTGTTTCCGCTCACAGCGGCCACCACGACGACGACGACGACGGAGACGCCGATGCCGACGGTGCTCCCGACTTACGCGCGAGGCCGTTGGTTTTGGCGAAGGTGTGGTGTCTGATTGTGATTTTCTTTGCGACGTTTGTGTCTGGGGTTTCGCCGTATGTGTTGAAGTGGAACGAGGGGTTTCTGGTTTTGGGGACTCAATTTGCTGGTGGGGTGTTTCTGGGAACTGCTATGATGCATTTTCTTAGTGATGCCAATGAGATGTTTGGTGATTTGACTGAGAAAGAGTACCCTTTTGCGTTTATGTTGGCTTGTGCGGGATACTTGCTTACCAATCTTGTGGATTGTGTGATTTCATCTATTTTGGCAAAGTCTCGCCGTGGTGCTGATGTTGAGAGTCAAGGGGATGAGACAGGCAAAGAAAGTGGCAATGGTGTTACTTCCCAGTCACAACACCACTCAGGAAACCATCATGCTATTGTATCTGTGAGTTCACTTGGAGACACCATCTTGTTGATTGTTGCCCTGTGTGCTCACTCAGTATTTGAGGGCTTAGCAATTGGAGTTGCTGAGACAAAAGAAGATGCTTGGAAAGCTTTATGGACAATCTGTCTGCACAAGATATTTGCAGCCATTGCCATGGGAATTGCTCTCCTCAGGATGATTCCTGATCGCCCCCTAGTGTCTTGTGCAATCTATGCTTTTGCTTTTGCTATCTCCAGTCCAATTGGTGTAGCCATTGGAATTATACTAGATGCTACAACACAAGGTCATGTGGCAGATTGGATCTTTGCTATATCAATGGGTCTAGCTTGTGGAGTCTTTGTCTATGTATCAATTAACCATCTATTGGCAAAAGGGTACGTGCCTCAGAAACCAACAAAGGTTGACTCAGCCTATTTCAAGTTTCTTGCTGTTGTGTTGGGCGTTGGAGTGATAGCGGTTGTGATGATTTGGGACACTTGA 1023 0.4702 MALPRRILFFSVLFLFLFLSVSAHSGHHDDDDDGDADADGAPDLRARPLVLAKVWCLIVIFFATFVSGVSPYVLKWNEGFLVLGTQFAGGVFLGTAMMHFLSDANEMFGDLTEKEYPFAFMLACAGYLLTNLVDCVISSILAKSRRGADVESQGDETGKESGNGVTSQSQHHSGNHHAIVSVSSLGDTILLIVALCAHSVFEGLAIGVAETKEDAWKALWTICLHKIFAAIAMGIALLRMIPDRPLVSCAIYAFAFAISSPIGVAIGIILDATTQGHVADWIFAISMGLACGVFVYVSINHLLAKGYVPQKPTKVDSAYFKFLAVVLGVGVIAVVMIWDT* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1262 340 MobiDBLite consensus disorder prediction 151 173 - -
Lja6g1262 340 PANTHER ZINC/IRON TRANSPORTER 31 339 - -
Lja6g1262 340 MobiDBLite consensus disorder prediction 157 173 - -
Lja6g1262 340 PANTHER ZINC TRANSPORTER 11 31 339 - -
Lja6g1262 340 Pfam ZIP Zinc transporter 51 335 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1262 Lja-Chr6 36810782 36813085 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1262 26 340 Inorganic Solute Cotransporters AT1G55910 61.610 3.36e-137 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1262 K14709 - gmx:100809940 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1262 6 36810782 36813085 Lja6g1262 6 36810782 36813085 ECH