Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1242 ATGTCTCCAACAACAACAACCATCATCACTATCACCACCACCTTCTTCTTCTTCTTCTTACCTCCAACCACACTATCCCAAACCACCACCTTCAACTTCCCCTCCTTCACCCTCCGCAACATCACCCTCCTCGGCGACTCCTTCCTCCACCACGGCGCCGTCGGCCTCACCCGCTCCACCCCCGTCCCCGCCTCCAGCTCCGGCACCCTCCTCTACAACAACCCCATCTCACCCAACACCACCTCCTTCTCCACCACCTTCTCCTTCTCCATCACCAACCCCACCACTCCCTCCTCAACCGCCCACAACCGCTTCTCCTTCTTCCTCAACTCCTCCCGCTTCCTCGCCGTCGATTTCAACACCAACCGCAACCAAGTCGCCGTCGAACTAGACAACACCTTCAATCCCATCCAAACCGCAGAACCAACCATCGATCTCAAAAGCGAGAAATTAATCACTTCTCGCATTGACTACCACAGCATCAACAAAAAGCTCACTGTTTACTTAGCATACTCGAATTCAACAAACCCTGAACCAAAACCCATCTTGAATGCTGATGTTGATCTTTCTGGGTATTTTAAGGAGAATCTCCATGTGGGGTTTTCTGGTTCTACTGAAGGAAGCACTGAGCTTCACCAAATCGTGAGTTGGAGCTTTGAGTCCTTTCAACTGGAGCCTCAGAATCAAAGCTTGCACAATGTTTCTTCTGGTAGCAGCCCTGTGAGGGTTGCAGTGGATGGTAATCCAGCTTCGAATTCGAACTCTACCAAGAACCGTAGTGGGAAACGATTTGCAATTGGTTTCTGTGTTGCCATTGTTGGTCCTGTTTTGTTCTGTTTAGTGCTTTCGGTTTTGGGGTATGTTTCGTTCCGGAAATGGAGTAACATGAGGAAGCAGAAGAAGAATTTTGGGGCTTGTCCTAAGGAATTTGGTTACAAGGAGTTGAAATCAGCTACAAAGGGGTTTCATGTCTCGAGGATACTCGGGAATGGATCATTTGGTACGGTGTATAAGGCTGTGTTTGTGTCTTCGGGAACCGTCGCAGCGGTGAAGAGGTCTAGGCATTCCCATGAGGGGAAGACAGAGTTTCTTTCTGAGCTTTCCATTATAGCTGGTTTGAGGCATAAGAATTTAGTTCAGCTCCAAGGTTGGTGTGTTGACAAGGGTGAATTGTTGCTTGTGTATGAATTTATGCCAAATGGGAGCTTAGATAAGATTCTCTACCAATCTGGGGGAAATAATAACAATTTGTTGAGTTGGTTTCAAAGACTTAACATTGTTGTTGGTTTAGCTTCTGTTCTTAGTTACCTGCACCAAGAATGTGAGCAGAGAGTGATCCACAGAGACATTAAAACTGGGAACATTTTACTAGATGGAAGCTTCAATCCCAGGTTGGGGGATTTTGGTTTAGCAAAGCTGATGGATCATGATAAGAGCCCTGTTTCCACTTTAACTGCTGGAACAATGGGGTATCTTGCACCTGAGTATCTTCAATATGGGAAGGCAACTGAGAAAACTGATGTGTTCAGCTATGGTGTGGTGGTGCTTGAAGTTGCTTGTGGGAGGAGGCCAATTGAAAAGGAGGGTGAAGAGATGGTGAATTTGGTTGATTGGGTTTGGGGGCTTCACTCTCAAGGAAAGATAATTGAAGCTGCTGATAAGAAGTTGAATGGGGAGTTTCAGGAGGAGGAGATGAAAAAGCTTTTGCTGTTGGGGTTGAGCTGTGCTAACCCTGATAGTGCAGAAAGGCCTTCCATGAGAAGAGTTTTGCAGATTCTTAACAATGAAGCAGTGCCAATTTTGGTGCCTAAAGTGAAACCAATTCTTACATTCTCATCTGGGTTGCCATTGACTCTTGATGAGATTGTCTCAGATGCTGAGAAAGAGTTTGGTTCTAGCCAGTATGTATGCCAGATAAAGATTAACTGA 1929 0.4624 MSPTTTTIITITTTFFFFFLPPTTLSQTTTFNFPSFTLRNITLLGDSFLHHGAVGLTRSTPVPASSSGTLLYNNPISPNTTSFSTTFSFSITNPTTPSSTAHNRFSFFLNSSRFLAVDFNTNRNQVAVELDNTFNPIQTAEPTIDLKSEKLITSRIDYHSINKKLTVYLAYSNSTNPEPKPILNADVDLSGYFKENLHVGFSGSTEGSTELHQIVSWSFESFQLEPQNQSLHNVSSGSSPVRVAVDGNPASNSNSTKNRSGKRFAIGFCVAIVGPVLFCLVLSVLGYVSFRKWSNMRKQKKNFGACPKEFGYKELKSATKGFHVSRILGNGSFGTVYKAVFVSSGTVAAVKRSRHSHEGKTEFLSELSIIAGLRHKNLVQLQGWCVDKGELLLVYEFMPNGSLDKILYQSGGNNNNLLSWFQRLNIVVGLASVLSYLHQECEQRVIHRDIKTGNILLDGSFNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVVLEVACGRRPIEKEGEEMVNLVDWVWGLHSQGKIIEAADKKLNGEFQEEEMKKLLLLGLSCANPDSAERPSMRRVLQILNNEAVPILVPKVKPILTFSSGLPLTLDEIVSDAEKEFGSSQYVCQIKIN* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1242 642 PANTHER - 28 625 - -
Lja6g1242 642 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 225 IPR013320 -
Lja6g1242 642 CDD STKc_IRAK 328 595 - -
Lja6g1242 642 Pfam Legume lectin domain 29 229 IPR001220 GO:0030246
Lja6g1242 642 SUPERFAMILY Protein kinase-like (PK-like) 307 616 IPR011009 -
Lja6g1242 642 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.7-RELATED 28 625 - -
Lja6g1242 642 Pfam Protein kinase domain 322 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1242 642 Gene3D Transferase(Phosphotransferase) domain 1 398 607 - -
Lja6g1242 642 SMART serkin_6 322 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1242 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Lja6g1242 642 ProSitePatterns Protein kinases ATP-binding region signature. 328 351 IPR017441 GO:0005524
Lja6g1242 642 Gene3D Phosphorylase Kinase; domain 1 286 397 - -
Lja6g1242 642 ProSiteProfiles Protein kinase domain profile. 322 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1242 642 Gene3D - 27 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1242 Lja-Chr6 36356634 36358752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1242 26 628 Receptor kinase-like Gene Family AT5G55830 55.945 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lja6g1242 Pkinase 5.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1242 - - gmx:100808744 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1242 6 36356634 36358752 Lja6g1242 6 36356634 36358752 ECH
Lja6g1242 6 36356634 36358752 Lja6g1242 6 36356634 36358752 PCT