Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1209 ATGAAGAGCAAAATTGTGTGCAAGAAGCAAGTGGATATGGAACTTGAAGAAGAACCAGAAGAGGGTGTGAAATGGGTCACACATTACTCTAGTGATCATCAAATACTTCTGGTGGGTGATGGTGATTTTTCATTCTCCCTTTGCCTTGCCAAGGCTTTTGGCTCCGCTGCCAACATTGTCGCCACTTCTCATGACTCATATGATGATGTTACCAGGAAGTACAAGCAAGCCAAGTCAAATTTAGATCAATTAAAGAAGCTGGGAGCATACTTGTTACATGGAGTGGATGCAACCAAAATGATGCTTCATTCAGATTTAAAAATGCGGCGGTTTGATCGAGTTATATTCAACTTCCCTCATGCTGGCTTTCATAGGAAGGAAGATGACAGGCGAATGATCGAGAGGCATAAAAAGCTTGTGTTTGGTTTCTTCGAAAATGCTAGTTGCATGCTTCGAGCCGATGGAGAAATTCATGTGAATCATAAAACTACAGCTCCTTTTAACAAATGGAACATAGAGAAGCTTGCTATGCAAAGCTTTCTGACACTGATTGAATGCTCTGACTTCAAGAAGGAAGACTACTCGGGTTATAACAATAAGCGTGGTCATAGCATTAGAAATAGATGTGATAAACCCTTTCCACTTGGTAAGTGCAGCACATTTAAGTTCATTTCCAATCCTAAGGCTAGGAGAAACTGGAAGAAGACAAGTCGTACAATGTTTGCTAGAAAGCAAACCAGACTTCCATTTCACAAAATTCAGGATGCTGTGGAGCAATTTCCAAGACCAATTGATCTTCATTATAATCCTCAAACAAGTCAAATTCCAAGAATGAATAAAGGAATGACATCCACACTTGATTTGACATATGGACACCCGCCAATACCTAGGGACTACTTCAACAATGTGGAAGCAGTACACAGAAGAACTCCTCCTTCTGTTGGCTATCATCCTTATGCACGTGGTATCAATTTAGGCTCTCCGAGTTCGTTTCAGCCGAGGGACTCATTGCAATCTTTGCAACCGGGGCCAACATCTACCAATGTTAGATATTCTCTGACAGATCATTTTGGAACAATTGATACTGTTACTGCATCACATGGTGCTAGAAATGTAGACTATCAAGTCTTTGGTGGCAGCAGCTCAAATTATTTGCAGGAAGGTCCTTGTAGAAGAGCTCAGAGGTCAAGTAACTTTCATGTTGGAACAAGGGACCCTGTTCCTTTATCACATGGTGGTAGAATTGAACACTACAAGGCCTTTGGTGGCAGCTCAAACTCTTTGCAAGAAGCACCTTGTAGAACAGTTAAGACTAAGAGTTCTTATTTTGATGTTGAAAGAACAATGGATACGGTTCCCTTATCACATCGTGCTGGAAATGAAGACTGCCAGGTTTTTGGTGGCAGTTCAAACTATTTGCCAGAAGCTCCTTATAGAACAGTTAAGAGTTCTTATTTTGATATTGGAACAAAGGACACTGTTCCTTTATCATATGGTGCTAGAAATGAAGACTATCAGGCCTTTTGTGGCTGCCCAAATTATTTGCAGGAAGCAGCATCTTATGGAACAGCTCACAGGTCAAGTTATTTTGGCAGTGTGAGATATGACTCTGAGAGGTACATTGCTGAAGAGATTGGGAGGAGGACTCTGAATGATGACATCTATAATGAGCCTCACCAAATGAGTGTTTTGATGTCAGAGAGAAGGATGTTTTTTGGGTCCTGA 1725 0.411 MKSKIVCKKQVDMELEEEPEEGVKWVTHYSSDHQILLVGDGDFSFSLCLAKAFGSAANIVATSHDSYDDVTRKYKQAKSNLDQLKKLGAYLLHGVDATKMMLHSDLKMRRFDRVIFNFPHAGFHRKEDDRRMIERHKKLVFGFFENASCMLRADGEIHVNHKTTAPFNKWNIEKLAMQSFLTLIECSDFKKEDYSGYNNKRGHSIRNRCDKPFPLGKCSTFKFISNPKARRNWKKTSRTMFARKQTRLPFHKIQDAVEQFPRPIDLHYNPQTSQIPRMNKGMTSTLDLTYGHPPIPRDYFNNVEAVHRRTPPSVGYHPYARGINLGSPSSFQPRDSLQSLQPGPTSTNVRYSLTDHFGTIDTVTASHGARNVDYQVFGGSSSNYLQEGPCRRAQRSSNFHVGTRDPVPLSHGGRIEHYKAFGGSSNSLQEAPCRTVKTKSSYFDVERTMDTVPLSHRAGNEDCQVFGGSSNYLPEAPYRTVKSSYFDIGTKDTVPLSYGARNEDYQAFCGCPNYLQEAASYGTAHRSSYFGSVRYDSERYIAEEIGRRTLNDDIYNEPHQMSVLMSERRMFFGS* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1209 574 Coils Coil 67 87 - -
Lja6g1209 574 MobiDBLite consensus disorder prediction 325 344 - -
Lja6g1209 574 PANTHER PHENYLALANYL-TRNA SYNTHETASE 20 226 - -
Lja6g1209 574 PANTHER BNAC06G26310D PROTEIN 20 226 - -
Lja6g1209 574 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 36 201 IPR019446 GO:0070042|GO:0070475
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1209 Lja-Chr6 35625138 35628584 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1209 - - gmx:100802899 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1209 6 35625138 35628584 Lja6g1209 6 35625138 35628584 ECH