Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1158 ATGTCTTCATCGTCGACCAACATTGCAAATCTCGAAAGCATAATAGACCGAGTTTTCTTCAGCTACACATTGGCGGACATTGAGGTGGAGCCTTTCATTTCCCTTCTCCACAAAAAACTATCAATCCCAACATGCTGCTTCGACAACATCAACAAGGTGAAGGGAAATCCTCCCCGGCGAGAAATCAAAGGGTCAGGGGTTTCCGTTGTTGTTTTCTCCGAGCGCTACGGTGGTTCCAGCCGGTGTCTGAAGGAGCTGGAAAAGATCTTGGAGTGTCACAGAGTCCAGGGTCAAGTGGTTTTGCCTGTGTTTTTTGGCGTTGATGTTTGCGATGTGCGGGAGCAAAAGGGTATCTTCGGGCAAGAGTTTGAACTGATGGTCAAGAGAAGGTCGGTGGAGGAAGACACCGTCTTGACTTGGAGAAAGGCCCTCTCGGAAATTGCTTCCTTTACGGGTTACTCTGCGCCCCCTGACCGATTCCGTTGTGATGCTGTGGGTAATATTGTGGGTTCTGTTCGTATGGTACTAGATAGTAAATTTTTGTCCCGCCCACTCCAAGCTGTAGGGTTAGATGTTCGTGCTGAAGATTTAATTGACAGATTTGGAATGAGGAGAACAACAGTTAGCTTTGTTGGAATATGGGGAAAGGGAGGAATTGGTAAAACATCCATTGCCAAAGTCATTTACAACAACATTTTCCACAGTTTTGAGGGTTCAAGTTTCCTTGCAAATATTAAGAATGTATGGAAGCAGGATAATGGTGACGATTATCTACGAAAACAACTTCTTTCTGACATCAATAATACAACAGACATGTCAGTAGGTAGCACTGAAATGGAGAAAATGTTATCTCACAAAAGGGTACTTGTAGTACTTGATGATGTGAGTCAGCTAGACCAACTGAAATCTTTATGTGGAAGTCGTGACAGGTTTGGTGTTGGGAGCACAATACTGATTACAACCAGAGAAAAGCAAGTACTTGATCTCTTTGAATTGGACGTTGTATATGAAATGAAGAAAATGGACACAAGTAAATCACTTGAGCTTTTTAGTTGGCATGCATTTAAGCATTATAGTCCTCCTAATGATTTGATCCAACTCTCAAGAAAAGCAATTTATTACTGTGGAGGACTGCCACTGGCTCTCGAAGTTTTGGGTTCGTTGTTACATGACAGAACAGCGTCAGAGTGGGAATGTATATTGAAGCTGCTTAATAGAAATCAAAGTAATGAGGTACTAAATGTCCTAAAACTGAGCTATGATTTTCTTGATGATGATATTCTTGATGATGATGAGAAGAAAATATTCATTGAAGTTGCTTGCTTCTATATGGGAAAGGACAGACACAATATCACACAATTATTGGATAGCTGCGGACTTGCTGCCGAAACTGGGATATGTAAACTTATTCAACGGGGCCTTCTAAAGGTTGACCAGAATAACAAGCTTGAAATGCATGATTTGGTGCAAGAGATGGGAATAGAACTGAATCGTTTGAAGCCAAAATCTAAATGGGTCCATGATGTGTTCCTGAGCTTTCGAGGTTCAGACACTCGCAGGTCTTTCACTTCTCATCTCTATGCCGCTTTACAAAATGCTGGTATTGAGGTTTACATGGATGACAAACTGAAAAGGGGAGAAAATATCTCATCCTCGTTGTTGCAAGAAATTGAATGCTCTAGAGTTTCTATAATCATTTTTTCAGTAAACTATGCAAATTCAAGATGGTGCCTACAAGAGTTGGAGAAAATCATGGAATGTCATAAAACTATTGGTCAAGAAGTTGTACCTGTATTCTATGATGTGGAACCGTCCGAAGTACGCAACCAAGTTGGATCTTTTGGAAAAGCACTGGAAGAACTTGTACAAAAAACCTCAGCTACGAAAGAAATGATTATCAGATGGAAAAGAGCACTCGCTGAAGCTGCAAACTTGTCCGGGTGGAATCTAAATAGTTACAGGACTGAAATTGAGATGATTGGTGATATTCTTAAAACTGTTACTGCAAGACTAGATGACAGTGCATACTTGGTTGTTGCTGATCACCCAGTGGGAGTGGAATCTCGTGTGCAGGACATGATTCAATTATTAAGTGGTAAATCAAATGAGGTTCGCATAGTAGGAATCTTGGGAATGGGAGGAAGTGGTAAAACAACCATTGCCAAAGCCATTTACAATGAAATTAATCAGAATTTTGAAGGCAAATGCTTCCTTCCAAATATAAGGGAAGCTTGGGACCAACATGATGGCAGAGTTGCTTTGCAAGAACAACTTCTTTCAGGCATCTTAAGAAATAGAAGGATGAAATTACATAGCATTGAATTAGGAAAAGCAATAATAAAGGAACGTCTTTGCCACAAGAGGGCACTTGTTGTACTTGATGATATAAATAGTTTGGACCAACTAAAAGCTTTGTGCGGGAGTCGTGAATGGTTTGGTCAAGGAAGTAGGTTAATCATCACAACTAGAGATGAGCATTTACTGAAAGTTCTTCAAGTGGTTCATATATACAGAACCCAAGAAATGGATGAAAGTGAGTCTCTTGAGCTTTTTAGTTGGCATGCATTTAAGCAAGTTGCTCCACCAGCAGATTTCATTGAACTCTCAAGAAGGGTTGTTGCTTATTCTGGAAGACTACCGCTAGCCCTTGAAGTTCTTGGCTCTCATTTGTTTGAAAGGGAAATTGCTGAGTGGGAAAGTGCATTGTCGAAACTTGAAGTTATTCCCCATGGTCAAATTCAAAAAAAATTAAAAATAAGCTATGATGGTTTAAGCGATGAGATGGAGAAAGATATATTCCTTGATATATGTTGTTTCTTCATAGGTAAGGGCAGAAACTATGTTACACAGATTTTAGATGGATGTGGACTTCATGGGGAAATTGGAATTACTGTCCTCATTGAGCGAAGCCTTTTAAAAGTTGACAAGAATAATAAGCTTCAAATGCATGATTTGCTCAAAGTAATGGGAAGAGAGATTGTACGTGAGATGTCACCAAAGAATCCCGAGAAGCGCAGCAGGTTATGGTTTCATGATGATGTTGTTGATATGATGACAAACAACACTGCAACAATAGCTGTCGAGGGACTGGCTTTAAGTTTACCAAAAAACAATGATGATGTTGTTTTTGGGACTAAAGCTTTTAAGAAGATGAAGAAACTCAGATTGCTTCAACTTGGTCATGTAAAACTTACTGGAGATTTTGAATATTTCTCGAAAGACTTGCGTTGGCTCTGCTGGCCTGGGTTTCCTTTAAGATACATGCCTGGGAACTTTTGTCTTAAAAAATCAGTTGCTATTGACTTGAAGCACAGCAATCTGCAATTTATCTGGAAGGAGCCTCAGTTGCTTGATAGGCTGAAATTCCTCAATCTGAGTCATTCCCATTACTTGACACATACACCTGATTTTTTAAGACTACCAAATCTTGAAAAGTTAATCCTGAAAGATTGTCCAAAATTATTGATGGTTCACCCAACAATTGGAGATCTTAAATATCTTATCCTGCTAAATTTGAAGGACTGTAAATCCCTCATTGACCTCCCAAAAAGTGTCTATAAGTCGAAATCTCTGAAATCTCTAGTTCTTTCCGGCTGTTCAAAAATTGACAAGTTGGAAGAGGACATCATGCAGATGGAGTCATTGACAAATCTAGAGGCAGATGACACTGCTATCACACAGGTTCCCGATTCTCTAATGAGATTAAAAAATATCAAACATGTGTCTCTGTGTGGCTATGAAGGATTATCAAGTCATGTATTTCCTTCTCTAATTTTGTCTCTAATGTCTCCACGTAATCTTATGTGTAAAGTTTTTGGGAGCATTTCATCATCACTTCAAAGTCTTTCAGTTGGTTTAGCTAGCATGAATCCTGCAGAAATGGAATTAAGACCAAGAACACCTCAGATAACATATACAGAAACTCACACATCAATTGATTTTCAGATCTCCATTCACACTGCAAAGTCTGAAAACTTGACAAGTTCTCTTGTTATTCAATCAGGAGAGTGCAGCAAAGCTAAAGCCACTGATAGTGATTCTTTTACAGAGAGTATTTCTCAGGGATGGACTAGTGATGGATCCGGTGACTGTGACTGTTCTTTTCCTGGTGGTGACACTAAATGGCTAACCTTCAAAAGTGAAGGTTCGTCATTGTTTTTTAAAATGCCCGACACTGATAGCAGGTTGAAAGGAATGACTCTCCATATTATATGTTCCTCTTCCCCTGTGAACATGGCTTCTGAATGTGATATTCTTAGCGTCTTGATAATGAATCACACAAAGAACATCATTCTGTCCTACAACCGAGGCACAGCATCTTCCTTCAAAGATATAGAATGGCAAGGATTTTTGTCAAATCTTGAACCTGGTAATGACGTGCAGGTTGTCGTAGTTTTGGGGCATCCATTTACTGTGAAGAAGACAATAGTCCATGTAATATATGGTGAATCAGCTGATGACATAATTATGGAGTATTCTTCAGCCATTCCTGCACCAGGACGAAAAAGGATGCTATAA 4518 0.3958 MSSSSTNIANLESIIDRVFFSYTLADIEVEPFISLLHKKLSIPTCCFDNINKVKGNPPRREIKGSGVSVVVFSERYGGSSRCLKELEKILECHRVQGQVVLPVFFGVDVCDVREQKGIFGQEFELMVKRRSVEEDTVLTWRKALSEIASFTGYSAPPDRFRCDAVGNIVGSVRMVLDSKFLSRPLQAVGLDVRAEDLIDRFGMRRTTVSFVGIWGKGGIGKTSIAKVIYNNIFHSFEGSSFLANIKNVWKQDNGDDYLRKQLLSDINNTTDMSVGSTEMEKMLSHKRVLVVLDDVSQLDQLKSLCGSRDRFGVGSTILITTREKQVLDLFELDVVYEMKKMDTSKSLELFSWHAFKHYSPPNDLIQLSRKAIYYCGGLPLALEVLGSLLHDRTASEWECILKLLNRNQSNEVLNVLKLSYDFLDDDILDDDEKKIFIEVACFYMGKDRHNITQLLDSCGLAAETGICKLIQRGLLKVDQNNKLEMHDLVQEMGIELNRLKPKSKWVHDVFLSFRGSDTRRSFTSHLYAALQNAGIEVYMDDKLKRGENISSSLLQEIECSRVSIIIFSVNYANSRWCLQELEKIMECHKTIGQEVVPVFYDVEPSEVRNQVGSFGKALEELVQKTSATKEMIIRWKRALAEAANLSGWNLNSYRTEIEMIGDILKTVTARLDDSAYLVVADHPVGVESRVQDMIQLLSGKSNEVRIVGILGMGGSGKTTIAKAIYNEINQNFEGKCFLPNIREAWDQHDGRVALQEQLLSGILRNRRMKLHSIELGKAIIKERLCHKRALVVLDDINSLDQLKALCGSREWFGQGSRLIITTRDEHLLKVLQVVHIYRTQEMDESESLELFSWHAFKQVAPPADFIELSRRVVAYSGRLPLALEVLGSHLFEREIAEWESALSKLEVIPHGQIQKKLKISYDGLSDEMEKDIFLDICCFFIGKGRNYVTQILDGCGLHGEIGITVLIERSLLKVDKNNKLQMHDLLKVMGREIVREMSPKNPEKRSRLWFHDDVVDMMTNNTATIAVEGLALSLPKNNDDVVFGTKAFKKMKKLRLLQLGHVKLTGDFEYFSKDLRWLCWPGFPLRYMPGNFCLKKSVAIDLKHSNLQFIWKEPQLLDRLKFLNLSHSHYLTHTPDFLRLPNLEKLILKDCPKLLMVHPTIGDLKYLILLNLKDCKSLIDLPKSVYKSKSLKSLVLSGCSKIDKLEEDIMQMESLTNLEADDTAITQVPDSLMRLKNIKHVSLCGYEGLSSHVFPSLILSLMSPRNLMCKVFGSISSSLQSLSVGLASMNPAEMELRPRTPQITYTETHTSIDFQISIHTAKSENLTSSLVIQSGECSKAKATDSDSFTESISQGWTSDGSGDCDCSFPGGDTKWLTFKSEGSSLFFKMPDTDSRLKGMTLHIICSSSPVNMASECDILSVLIMNHTKNIILSYNRGTASSFKDIEWQGFLSNLEPGNDVQVVVVLGHPFTVKKTIVHVIYGESADDIIMEYSSAIPAPGRKRML* 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1158 1505 CDD ABC_ATPase 697 829 - -
Lja6g1158 1505 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 516 1480 - -
Lja6g1158 1505 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 60 498 - -
Lja6g1158 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 674 936 IPR027417 -
Lja6g1158 1505 SUPERFAMILY L domain-like 995 1281 - -
Lja6g1158 1505 Gene3D Ribonuclease Inhibitor 1030 1298 IPR032675 -
Lja6g1158 1505 SUPERFAMILY "Winged helix" DNA-binding domain 411 499 IPR036390 -
Lja6g1158 1505 Gene3D - 16 176 IPR035897 -
Lja6g1158 1505 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 516 1480 IPR044974 GO:0006952
Lja6g1158 1505 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 60 498 IPR044974 GO:0006952
Lja6g1158 1505 SMART till_3 506 645 IPR000157 GO:0007165
Lja6g1158 1505 SMART till_3 15 150 IPR000157 GO:0007165
Lja6g1158 1505 SUPERFAMILY Toll/Interleukin receptor TIR domain 503 648 IPR035897 -
Lja6g1158 1505 Pfam NB-ARC domain 206 420 IPR002182 GO:0043531
Lja6g1158 1505 Pfam NB-ARC domain 687 923 IPR002182 GO:0043531
Lja6g1158 1505 Pfam TIR domain 59 148 IPR000157 GO:0007165
Lja6g1158 1505 Pfam TIR domain 507 667 IPR000157 GO:0007165
Lja6g1158 1505 Gene3D - 341 424 IPR042197 -
Lja6g1158 1505 Gene3D - 841 925 IPR042197 -
Lja6g1158 1505 Gene3D - 177 334 IPR027417 -
Lja6g1158 1505 Gene3D - 674 836 IPR027417 -
Lja6g1158 1505 ProSiteProfiles TIR domain profile. 14 176 IPR000157 GO:0007165
Lja6g1158 1505 SMART AAA_5 703 841 IPR003593 -
Lja6g1158 1505 SMART AAA_5 207 342 IPR003593 -
Lja6g1158 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 426 IPR027417 -
Lja6g1158 1505 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 153 IPR035897 -
Lja6g1158 1505 Gene3D - 501 673 IPR035897 -
Lja6g1158 1505 PRINTS Disease resistance protein signature 876 890 - -
Lja6g1158 1505 PRINTS Disease resistance protein signature 706 721 - -
Lja6g1158 1505 PRINTS Disease resistance protein signature 1162 1178 - -
Lja6g1158 1505 PRINTS Disease resistance protein signature 783 797 - -
Lja6g1158 1505 ProSiteProfiles TIR domain profile. 505 671 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1158 Lja-Chr6 33708201 33727191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1158 18 498 WRKY Transcription Factor Family AT4G12020 28.455 1.07e-42 169