Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1142 ATGGGTTTGAATGTAAAGGAGGTTCAACTTCGTTTGTGCAAAGTGGTTCAAGTTTCATATCAATCTAGTTACACCTTTCTACGAAAGCATCCAATTGTTTCTGGTGCCTTGTCGGTGTGCTTCATCCTGTATATACTTCTTTCTTATATCTATAGATTCTTGGCCTATTTGTCCCCTTTTCTTGTATGTGCTGCTATTTTTGTAAGAATCTTTTGGAGTTCTGAGCAAACTCAGCTCAGATATATCAAAGATTTCAAGGAGAAGGGAGAGAAAAGAAGGGTAGAACCAAAATATCCAAAGATTCCTAACAATGCGAGGCGCGAAATGCTCCATAAGTATCCATCACAAAGTGCCACAAGTAGGAGGAGAAATCTCAGGTACAAGAAATGGGATGTGTATGGTGGTTTAGAGGAAAAAGCCAAGGATTTATCAGCAGCTTTTCATAATGAGTTCACAAAAGGTGAGAGTTCTTTAGACTATGGATTGTCTGGGAAAAAAACTCAGGCTCCTAAGAGGCAAACCTTGAGATCTGAACCTTCAATGGTTGACCTAGTGGAGTGTGGTGATGCTGAGATAGAAAAGATGGAGTATGATGAGGATGAGGAGGATGCAATGGAGGAGGAAAGGAACAAACCCATAGAATGGACAGAGGATGATCAGAAGAATCTCATGGATCTTGGGAATTCAGAGATGGAGAGGAACAGAAGATTGGAGAGTCTCATAGCCAGAAGAAGAGAAAAGAAACTAATGAAGATGCAACTTGAGAGTGGTCTAATTGATAAAAGACCAATCACATCATCAAATCCAATTGCACCACTACTAATTAAAAGAGGAAATCCAAAGGACTTTGAAGGGATTGATGACTTAGAAATGCCTGGTTCTGCTCCATCTTACATGCCAAGAAGCCCATATGACATTCCTTATGATCCTTGTGAGGAGAGGCCTAACCTCACAGAAGATAGTTTACTTCAAGAGTACACAAGTAATCAGAAGGACAACATTACATTCTGCAGGCATGAAAGCTTCAGTTTAGGCCCCTTTAACCCATCAGAAACGAATCAGGACCAAGGAGCTAGAGGGTACTACTCATTTAATCAAAGGAGGAAGTATTCAGACAGGCTTCCGTACTCAAGATTCAGAAGTCATCCAGATAAGGGAAATCATGACTGGCTAATTGACCAGTTGCTCTACAATGAAGGAGGTGAAAATGGATCAGAAACACCTAATCCAGTGAGTAAAGGACATGAAACAACACATGAAGAGAATGGGAAATGTGAGACTAGTGTAGCTGACATGAAAGTAGAGGAAGTGGAGAATGCCCATGAAGCAAAATCTATGTCAAATCAGACAAGCAAGAGTACAGGCCTAGTTCCAAACATCTCAAATGTTGAAACAACTCATATTTCAGAAAAGTCAAGGTTTTGTGAGCCTCATAAGAGGCTACTCAATTTACCAGAATCTACTAAAACAGCAAGAAGTGTCACTATAAATGAATCATCTATGCATGACAGTGTTCCATCTCCTGTTGATAAGAGACAAGAAATGATGTTCTTAACCGATAGGCGTGTTTGTCACACCCCAACATATTCCATTGCTTCTGACTTGCAAGTGGAGGTTTCTGAAGTTGGTTCACCAACATCAACAATTGAAGAAAATGCTAATAGCAATTCAACTTCTGATAGAGACTCCTCTATTTTGTATGATGGGGACATTGATAGAGATGTTAGTTCTGGCAGTGAAGATTTGTGGGGAGCCTCTTTCCATGGAACACGTGGAGTTAGAAGTGAGGAGAATAATGAAGAAGTAAACAACTCAAAGGACATTATTTCACCAATTTCTCTAAGACAAATAGATGAAGAAAATGTAGCTGATGTGAGCTCCATGTCCTCAAGATCGGATTTGCCTGAAGATACTCCAACTTGTGCAAGAAGTAGTGATCATCATAACATCTTTGGTTATATGAAATATTCTGAAAGGGAAAATGAATCACCCCAATCTTCCATTTCTTCTTCTGTGTCATCACATCAGACGTCGTTGATTGGTAGCTCCGAATACAACCAGTCAGAGAATTTGATAACTGAGTCACTGGTTATCAATGATGTGAGTATCTCAGCAGTAATAGAGCAAAATAACAATGAGAACACAATAAGTAATGAAGATCCAAGTCCCAGCACGTCAGTTTTGCGGCAAGAATCAGTTGACGAAGGTTCTAACTCCTCAATCGCATCATCACCAAGATCCGTATTACCAGAGAAGACCATAGTAGATGAAGTTTCATCATCAGCCTCTACACAACAGTTGCATACAGGTTCTCAGCATTCTGAAATGGAGTTTATGGCCCAAGAAACTTTAAATGATGATAAGATTGACAAACCAGCAAGTAGTAACATCCATGAGGACTTGTTCCGTTTAATTTTTTATGATTCTGCAAACGGTACTGACGTGGATTATATTTTTCTAAAATTATTAGGGTGCCACGTAAGTAAATTAGGGTTGAAAAAATAA 2505 0.394 MGLNVKEVQLRLCKVVQVSYQSSYTFLRKHPIVSGALSVCFILYILLSYIYRFLAYLSPFLVCAAIFVRIFWSSEQTQLRYIKDFKEKGEKRRVEPKYPKIPNNARREMLHKYPSQSATSRRRNLRYKKWDVYGGLEEKAKDLSAAFHNEFTKGESSLDYGLSGKKTQAPKRQTLRSEPSMVDLVECGDAEIEKMEYDEDEEDAMEEERNKPIEWTEDDQKNLMDLGNSEMERNRRLESLIARRREKKLMKMQLESGLIDKRPITSSNPIAPLLIKRGNPKDFEGIDDLEMPGSAPSYMPRSPYDIPYDPCEERPNLTEDSLLQEYTSNQKDNITFCRHESFSLGPFNPSETNQDQGARGYYSFNQRRKYSDRLPYSRFRSHPDKGNHDWLIDQLLYNEGGENGSETPNPVSKGHETTHEENGKCETSVADMKVEEVENAHEAKSMSNQTSKSTGLVPNISNVETTHISEKSRFCEPHKRLLNLPESTKTARSVTINESSMHDSVPSPVDKRQEMMFLTDRRVCHTPTYSIASDLQVEVSEVGSPTSTIEENANSNSTSDRDSSILYDGDIDRDVSSGSEDLWGASFHGTRGVRSEENNEEVNNSKDIISPISLRQIDEENVADVSSMSSRSDLPEDTPTCARSSDHHNIFGYMKYSERENESPQSSISSSVSSHQTSLIGSSEYNQSENLITESLVINDVSISAVIEQNNNENTISNEDPSPSTSVLRQESVDEGSNSSIASSPRSVLPEKTIVDEVSSSASTQQLHTGSQHSEMEFMAQETLNDDKIDKPASSNIHEDLFRLIFYDSANGTDVDYIFLKLLGCHVSKLGLKK* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1142 834 Coils Coil 190 210 - -
Lja6g1142 834 MobiDBLite consensus disorder prediction 542 564 - -
Lja6g1142 834 MobiDBLite consensus disorder prediction 712 747 - -
Lja6g1142 834 MobiDBLite consensus disorder prediction 345 361 - -
Lja6g1142 834 MobiDBLite consensus disorder prediction 620 639 - -
Lja6g1142 834 MobiDBLite consensus disorder prediction 399 425 - -
Lja6g1142 834 MobiDBLite consensus disorder prediction 712 750 - -
Lja6g1142 834 MobiDBLite consensus disorder prediction 342 364 - -
Lja6g1142 834 MobiDBLite consensus disorder prediction 542 646 - -
Lja6g1142 834 PANTHER PROTEIN, PUTATIVE-RELATED 1 797 - -
Lja6g1142 834 PANTHER CARDIOMYOPATHY-ASSOCIATED PROTEIN 1 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1142 Lja-Chr6 33140634 33146120 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1142 - - aprc:113851189 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1142 6 33140634 33146120 Lja6g1142 6 33140634 33146120 ECH
Lja6g1208 6 35607786 35610469 Lja6g1142 6 33140634 33146120 PCT