Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1136 ATGAGTGGCAGAGCTCTTGTTTTCTCTTTCTCTCCTCCTTCACCCTCTTCCCCTTCACGCAGAACCACCCACTTCAACCATGCAACTTCCACCACCTCCTCCAGTACTTCACTGTTCCCTTTACACTTGCGGAGCTGCCTCGTCTTCCGTGTTACCGGCAGAAGGGGCGGTGGTGGAAAGGTGTGGGCGGATGTCAAGTCGGAGAAGCACGCGCACGAATCATCCAGCTTGCATGAGGATGTTGCCCTTGAGAAGAAGGTCCCTGGTTTGGATGATGTGGAGGAGCTGGAAGAAGTTGCAGCAGCGTGGTGGCAAGTGTTTCCTAAGAGATGGGTCATCGTCATCCTCTGCTTCTCTGCGTTTCTCCTTTGTAACATGGACAGAGTAAATATGAGCATTGCTATACTTCCTATGTCAGCAGAGTACAACTGGAGCCCCAGCACTGTCGGTTTAATACAGTCTTCATTCTTTTGGGGATACCTCCTCACTCAGATTGCTGGTGGAGTATGGGCAGACAAAGTAGGGGGAAAGCAGGTATTAGGATTTGGAGTGGTTTGGTGGTCTGTTGCGACTATTCTCACTCCTGTAGCTGCCAAACTTGGGTTGCCTTTCCTACTAGTTGCTCGTGCGCTAATGGGGATTGGTGAGGGTGTTGCTATGCCAGCCATGAATAATATTCTATCTAAATGGGTTCCTGTGGCAGAGAGAAGTAGATCACTAGCGCTTGTCTACAGTGGCATGTACCTAGGATCAGTTACTGGACTGGCCTTTTCACCCTTCCTAATTCATCAGTTTGGATGGCCATCAGTATTTTACTCCTTTGGTTCTCTAGGGACGGTTTGGTTTTCTGTGTGGCTTAGTAAGGCACATAGTTCACCTCTTGAAGATCCTGAATTGCGGCCTGAAGAAAAGAAGTTGATTCCTACCAATAGTTTTTCCAAGGAACCATTGAAAGAAATACCTTGGGGATTAATCTTGTCAAAAGCACCTGTCTGGGCCCTGATAGTGTCCCATTTTTGCCATAACTGGGGAACTTTCATTCTTCTAACATGGATGCCAACATACTATAATCAAGTTTTGAAGTTCAACCTTACAGAATCGGGGCTGTTTTGTGTTTTACCGTGGTTTACAATGGCACTTTCTGCAAATCTTGGAGGTTGGATTGCAGACACTCTTGTCAGCAAAGGTGTATCAGTTACAACGGTCCGCAAGATTATGCAAACAGTTGGGTTTCTTGGCCCTGCTTTCTTCTTAACTCAATTGAGCCACATTCATTCTCCTGTAATGGCTGTTTTGTGTATGACTTGCAGTCAGGGAACTGATGCATTCTCACAGTCTGGATTGTATTCAAACCATCAAGATATAGCCCCTCGATATTCTGGGATATTGCTTGGTCTATCTAATACTGCTGGAGTGCTGGCTGGTGTCCTTGGAACTGCAGCAACAGGTTACATTCTGCAGCATGGCTCCTGGGATGATGTTTTCAAGGTTTCAGTAGGGCTATATTTGGTTGGAACTGTGGTGTGGAACCTTTTTTCAACTGGTGAAAGGATCTTGGAATAA 1563 0.4639 MSGRALVFSFSPPSPSSPSRRTTHFNHATSTTSSSTSLFPLHLRSCLVFRVTGRRGGGGKVWADVKSEKHAHESSSLHEDVALEKKVPGLDDVEELEEVAAAWWQVFPKRWVIVILCFSAFLLCNMDRVNMSIAILPMSAEYNWSPSTVGLIQSSFFWGYLLTQIAGGVWADKVGGKQVLGFGVVWWSVATILTPVAAKLGLPFLLVARALMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHQFGWPSVFYSFGSLGTVWFSVWLSKAHSSPLEDPELRPEEKKLIPTNSFSKEPLKEIPWGLILSKAPVWALIVSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWFTMALSANLGGWIADTLVSKGVSVTTVRKIMQTVGFLGPAFFLTQLSHIHSPVMAVLCMTCSQGTDAFSQSGLYSNHQDIAPRYSGILLGLSNTAGVLAGVLGTAATGYILQHGSWDDVFKVSVGLYLVGTVVWNLFSTGERILE* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1136 520 Gene3D MFS general substrate transporter like domains 108 297 IPR036259 -
Lja6g1136 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 113 517 IPR020846 GO:0022857
Lja6g1136 520 MobiDBLite consensus disorder prediction 7 31 - -
Lja6g1136 520 MobiDBLite consensus disorder prediction 1 31 - -
Lja6g1136 520 SUPERFAMILY MFS general substrate transporter 102 512 IPR036259 -
Lja6g1136 520 PANTHER SOLUTE CARRIER FAMILY 17 93 520 - -
Lja6g1136 520 Pfam Major Facilitator Superfamily 117 478 IPR011701 GO:0022857|GO:0055085
Lja6g1136 520 Gene3D MFS general substrate transporter like domains 325 516 IPR036259 -
Lja6g1136 520 CDD MFS_SLC17A9_like 114 513 IPR044777 -
Lja6g1136 520 PANTHER ASCORBATE TRANSPORTER, CHLOROPLASTIC 93 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1136 Lja-Chr6 33048528 33057691 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1136 64 520 Organic Solute Cotransporters AT4G00370 75.594 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1136 K08193 - gmx:100792104 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1136 6 33048528 33057691 Lja6g1136 6 33048528 33057691 ECH
Lja6g1360 6 38769146 38772415 Lja6g1136 6 33048528 33057691 PCT