Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1113 ATGAAGCTCTCAACTTCCTCCTATCATGCATCCACATCCACATCATCATCATCATCATCATCCACCATAACTATGCACAATTCCAAAAGCACCACCAATGCAGGGTGTCTCATAAGCATTTTTCGCAAGATTCTTTGTTCTCGTGGCGTTCCAACACAGTCATCAGATCAAACTAGAGAACTTCGTGCCTCAAATTCAATGGGAAGTGGAAAAGCTCAAGACTTGAATGCTGAGGCTGGTGCTGCTTCTACTACTACTCCTGGGATAGTGGCAAGGTTGATGGGTTTGGAATCAATAGCATCATCAGAGATGCCCTGTTCATCAAAACCAGGTTCACTTTCGCGTAGCCGATCAATGAATTCTATGGATCAGGATTACTTGGGAGATTGCAATGGAATGCAGGGTCTGCAAAAGAAGGTTAAGTCCACATTGTCATTTAGGGAGGTGCCAACTTTTCTTTTGATTGAAAATGAAAAGTTTTTGGTGTTTAGCTTTGAAAATGGAGGTGAGAGCAGAGCATTCAAGTCCACTGGGAGAAAAAATGAAATTGGCTATCCAGAACTGAAGCAGAAAGTGCCAACAAAGAGGGGTGAGTTGAAGGAAAATAAGAGAGAAAAAGTGTGTGATAAGAAGAAGGGGCAAATGAGCAGAAGGGTGTGTGATGTGTCTTGTGGAAATGTTAGAAATGATGGTAAACTTCAAGATATCACCAACACTCTGCATGTGTCCAAGGATTCATCTGAAAATAAATGTTTTGATTCAGAAGCATTGAAATTGTCACAGTCACAGCACTTGATCAATTGCAAGGAAGTTGTGATTGGTGGAAAGAAGAAGAGAAAGAAGAAGAAAACAAATTGTCAAACAGAAAACAAGATAGAAGTCGAATGCAAATCACAAGATTCAAGTCCAGTTTCTGTCCTTGATTTTGAGCGTGAAGCTTGCGGAAAAGTTGGTTTGAATTCAAGAAGGAAATTGTCAGCAGAGCTTGAAAATGATCAGAATTTTCATCTTCGTTCTGATGATAATTTGGTGATTGATGAAAGGAAGGTCAAGGCAACTGAGAACACCAAATTTGGAGGACCAAAGGAGTATACAGGTATTAGGGGTGAAATTTGCAGGCTAGTTGAAGATGATTTAGCTCGATCAAATCAGATACATGGATGGATGAATGAGCAATGTGAATTAGAAAGTTTGAGTGCAGAATTTGAGTCAGAAATTTTTGATCAATTGTTAAATGAGCTGATGGTTGAACTTGTTGGGCATTCCCACTCACAAGTTTGCAACTTCAAGATTTTGTAA 1299 0.3965 MKLSTSSYHASTSTSSSSSSSTITMHNSKSTTNAGCLISIFRKILCSRGVPTQSSDQTRELRASNSMGSGKAQDLNAEAGAASTTTPGIVARLMGLESIASSEMPCSSKPGSLSRSRSMNSMDQDYLGDCNGMQGLQKKVKSTLSFREVPTFLLIENEKFLVFSFENGGESRAFKSTGRKNEIGYPELKQKVPTKRGELKENKREKVCDKKKGQMSRRVCDVSCGNVRNDGKLQDITNTLHVSKDSSENKCFDSEALKLSQSQHLINCKEVVIGGKKKRKKKKTNCQTENKIEVECKSQDSSPVSVLDFEREACGKVGLNSRRKLSAELENDQNFHLRSDDNLVIDERKVKATENTKFGGPKEYTGIRGEICRLVEDDLARSNQIHGWMNEQCELESLSAEFESEIFDQLLNELMVELVGHSHSQVCNFKIL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1113 432 PANTHER - 1 422 - -
Lja6g1113 432 PANTHER OS05G0128300 PROTEIN 1 422 - -
Lja6g1113 432 MobiDBLite consensus disorder prediction 1 28 - -
Lja6g1113 432 Pfam DUF761-associated sequence motif 82 99 IPR032795 -
Lja6g1113 432 MobiDBLite consensus disorder prediction 51 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1113 Lja-Chr6 30588707 30590124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1113 31 418 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 28.354 3.55e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1113 - - gmx:102660067 422.935