Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1103 ATGCCGAAGAACATTCAGAAATCCCTTAGTGACTACCTCTCCAAGATCAAAAACCCTCGCTCACAAATCCATTTACCCTCTATGAAATGGATCCTCAGAGGCTGCAAACATCTCAGCACTCCTTCTTTCTCCATGGATGATAAGAGAAACAAAAAGAATGACAATGAAGCCACTCTAGATGACATTGACCGTTTTCTCTTTGAGAATTTCAGGTCTCTATTCCTCGGAGACGGTGAAGAAATCAACAACGAAAAAAATGCCCACAAACCCCATGGAAAATCGCCAATGCCAAGTCCGACGTCCTTTGATTCATTTGAAGAATCATCACCAGATCTCGGAGGCTCTAAAAGGTTCTTTGTGACCCGTGGCTTCTCAGGGTCGAGCAGCTCAGCTGCGACACCAGCACAGAACGGCGAATATTCATGTTCAAAGGAGACAACCACATTGCTCAATACCTGTGTGGCGGTGTTGGTGCCATGCACAAAGAGCCCCTACGAGGAATTCAAGAGATCGATGGAAGGTGTGGTGGGAGCGAGGCTGAGGAACGATGAGAAGGTGGACTGGGATTTCATGGAAGAGCTTTTGTTCTCTTACATGAACATGAATGAGAAGAAGGCACACAAGTTCATTCTCGCTGCTTATGTGGATGTGATCAGCCTCATGCGCAATCCTCTGCAGCCTGCTCCAGCGAAGAGTGTGAGGACTATGAGGATCGGCATGGAGATAAGGAAGAAGCTTGAAGGAGTGAAATTGGATTGA 759 0.4664 MPKNIQKSLSDYLSKIKNPRSQIHLPSMKWILRGCKHLSTPSFSMDDKRNKKNDNEATLDDIDRFLFENFRSLFLGDGEEINNEKNAHKPHGKSPMPSPTSFDSFEESSPDLGGSKRFFVTRGFSGSSSSAATPAQNGEYSCSKETTTLLNTCVAVLVPCTKSPYEEFKRSMEGVVGARLRNDEKVDWDFMEELLFSYMNMNEKKAHKFILAAYVDVISLMRNPLQPAPAKSVRTMRIGMEIRKKLEGVKLD* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1103 252 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 161 220 IPR006458 -
Lja6g1103 252 ProSiteProfiles OVATE domain profile. 157 220 IPR006458 -
Lja6g1103 252 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 237 IPR038933 GO:0045892
Lja6g1103 252 MobiDBLite consensus disorder prediction 82 110 - -
Lja6g1103 252 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 237 - -
Lja6g1103 252 Pfam Transcriptional repressor, ovate 162 219 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1103 Lja-Chr6 29291845 29292603 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lja6g1103 Ovate 3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1103 - - lja:Lj0g3v0256019.1 459.144