Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1092 ATGGAGGATCATTTTTTATCCTTCCCCATCCTTCTCTGTCTTACCCTCTTAATGGTTATGATCTTAAGCACCATAAAGAGATTCAAAACAACTAACACAACCTCCAATCTTCCTCCAGGGCCATGGAAGCTGCAGATTCTTGGAAGCATACATCACCTCATTGGCTCCCTCCCCCACCGCTGGCTGAAAGAGTTATCCCAAAAATATGGCCCTCTAATGCACCTACAACTTGGAGAGACATCATCCATAGTGAAAACTCATGAAATCACATTTGCTCAACGACCTCGCTTTCTCGGTGCAGAAATTGCAGCTTATGGCTGCACTAATATTGTCTTCTCACCATATGGAGAGTATTGGAAGCAGCTAAGAAAAATATGCACACTGGAGCTGTTGAGTTCTAAACGTGTGCGATCATTCCAATCAATTAGGGAGGAAGAGGTATCACATTTAATGAGATATATATCTACTAACACAGGATCATGTATCAACCTCACGGATAGAGTTTTATATATGGCATATAGCATCGTCGCAAGAGCAGCTTTTGGTGATAAATGCAAGGACCAAGAAGCATATGTCTTCTTCATCAAGAAAAGTATGAGATTGGCTGAAAGTTTCAGTGTTACTAACTTGTTTCCTTCCCAACGTTGGCTACATGTGGTTACTGGAATGATGCATAAGTTGAAGGAAATACATAGAAATAATGATATAGTTCTTGAAAATATCATCAATGAAGCAACAACAAAGACTGGAGGAGATGGAAGTCTTCTGTCTGTTCTTTTGAATCTGAAAGATCATGGTGCCCCTGAATTTAACTTGACAATCAACAACATAAAAGCCGTTATTCAGGACATGTTTATAGCTGGAAGTGAGTCATCATCTACTATTTTAGAATGGGCGTTCTCAGAAATGCTGAAGAACCCAAGAGTAACGAAAAGGGCTCAAGCAGAAGTTAGGAAAGTTTTTGGTAGCAGAGGGTATATTGATGAAATGGCTATTGAGGAACTGAAATTTCTAAAAGCAGTGATTAAAGAAACTTTGAGACTATACCCTCCTGCTCCTTTACTAGTACCAAGAGAGTGTGGTGAAACTTGTGAGATTAATGGATACACAATACCAAGATTCCTGGATTGTCCAATTGACTACAAAGGGTCCAATTTTAAATTTATACCTTTTGGTGCAGGAAAGAGAATATGCCCTGGCATTGTGTTTGCTCTACCCAGTATTGAACTTCCTCTAGCACAATTGCTGTACTATTTTGATTGGGAACTTCCATTTGGAACTAGTCATGAAGATTTTGACGTGACTGAAGATTTTGGCACTACAATGAGAAGGAAAAATGATCTAGTTGTGATTCCCATTTCTTACAATCCTGTATCTATTGAATAA 1386 0.3903 MEDHFLSFPILLCLTLLMVMILSTIKRFKTTNTTSNLPPGPWKLQILGSIHHLIGSLPHRWLKELSQKYGPLMHLQLGETSSIVKTHEITFAQRPRFLGAEIAAYGCTNIVFSPYGEYWKQLRKICTLELLSSKRVRSFQSIREEEVSHLMRYISTNTGSCINLTDRVLYMAYSIVARAAFGDKCKDQEAYVFFIKKSMRLAESFSVTNLFPSQRWLHVVTGMMHKLKEIHRNNDIVLENIINEATTKTGGDGSLLSVLLNLKDHGAPEFNLTINNIKAVIQDMFIAGSESSSTILEWAFSEMLKNPRVTKRAQAEVRKVFGSRGYIDEMAIEELKFLKAVIKETLRLYPPAPLLVPRECGETCEINGYTIPRFLDCPIDYKGSNFKFIPFGAGKRICPGIVFALPSIELPLAQLLYYFDWELPFGTSHEDFDVTEDFGTTMRRKNDLVVIPISYNPVSIE* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1092 461 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 391 400 IPR017972 GO:0005506|GO:0016705
Lja6g1092 461 PANTHER CYTOCHROME P450 71B11-RELATED 15 372 - -
Lja6g1092 461 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1092 461 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1092 461 PRINTS P450 superfamily signature 389 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1092 461 PANTHER CYTOCHROME P450 FAMILY PROTEIN 373 455 - -
Lja6g1092 461 Pfam Cytochrome P450 373 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1092 461 Pfam Cytochrome P450 38 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1092 461 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 372 - -
Lja6g1092 461 Gene3D Cytochrome P450 30 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1092 461 PANTHER CYTOCHROME P450 71B11-RELATED 373 455 - -
Lja6g1092 461 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1092 461 PRINTS E-class P450 group I signature 388 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1092 461 PRINTS E-class P450 group I signature 398 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1092 461 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1092 461 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1092 461 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja6g1092 461 SUPERFAMILY Cytochrome P450 38 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1092 Lja-Chr6 27707504 27723288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1092 11 453 Cytochrome P450 AT5G25140 35.102 7.08e-98 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1092 - K23807 gmx:100779851 528.865