Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1082 ATGGAATTCAACAAGTTCAGAATCCGAAGCTATGAAGCACAATCTGATAGAGCTCAAGTGGAAAATCTCGAGAAAAGATGTGAGGTAGGGCCATCAGAAAGCGTGTTTCTCTTCACAGACACTATGGGTGACCCCATTTGTAGGATTCGAAACAGTCCCATGTACATGATGCTGGTAGCAGAGTTTGATAATGAGTTGGTTGGTGTCATTCAAGGCTCTATAAAAGTGGTCACAGTTCATGGTCATGATCCTCCAAATGGTTTGGCAAAGGTGGGGTATGTCCTTGGCCTAAGGGTAGCACCCCATCATAGGAGAAAAGGGATTGGCTCCAACCTAGTGAGAAAGCTAGAAGAATGGTTCACTTGCAATGATGTGGACTATTCATACATGGCCACAGACAAAAACAACCATGCCTCTGTTAGTCTCTTCATGAACAAGTTTAGCTACACCAAGTTCATGACACCAGCTATTCTTGTGAACCCAGTGAACCACTATTCACTTGAAATCCCATCCAACATTGAGATAACAAGGCTCAAGGTTGAAAAAGCTGAACCCCTCTATAGAAAGTTCATGGGCTCCACTGAGTTTTTCCCAAATGACATAGGTAACATACTTAGGAACAAGCTAAGCTTGGGGACATGGGTGGCTTATTTCAAAGGAGATGATTTTGGGTCAGATGGACAAGTCCCACATTGCTGGGCTATGCTTAGTGTATGGAACAGTGGGGAAGTATTTAAGCTGAGGCTTGGGAAAGCACCTTTATGTTGCTTTCTATACACCAAGAGTTGGTGCTTGATTGATAAAATTTTCCCATGCTTGAAACTTCCTACCCTGCCTGATTTCTTCAACCCATTTGGGTTTTACTTCATGTATGGGGTGTATCATGAAGGGCCATTCTCAGGGAAGCTTGTGAGGGCTTTGTGTCAGTTTGTGCACAACATGGCTGCAGAGTCCAAGGATGAGAACTGCAAGATCATTGTGACTGAAGTTGGAGGAAGAGATGAGCTCAATCATCATATCCCACATTGGAAATTGCTCTCCTGCCCAGATGATTTGTGGTGCATAAAGGCCTTGAAAAGTGAAGGGACAAATACTTTCCATGAATTAACCGAAACCCCACCCACAAGAGCTCTTTTTGTAGACCCTAGAGAGGTTTAA 1158 0.4361 MEFNKFRIRSYEAQSDRAQVENLEKRCEVGPSESVFLFTDTMGDPICRIRNSPMYMMLVAEFDNELVGVIQGSIKVVTVHGHDPPNGLAKVGYVLGLRVAPHHRRKGIGSNLVRKLEEWFTCNDVDYSYMATDKNNHASVSLFMNKFSYTKFMTPAILVNPVNHYSLEIPSNIEITRLKVEKAEPLYRKFMGSTEFFPNDIGNILRNKLSLGTWVAYFKGDDFGSDGQVPHCWAMLSVWNSGEVFKLRLGKAPLCCFLYTKSWCLIDKIFPCLKLPTLPDFFNPFGFYFMYGVYHEGPFSGKLVRALCQFVHNMAAESKDENCKIIVTEVGGRDELNHHIPHWKLLSCPDDLWCIKALKSEGTNTFHELTETPPTRALFVDPREV* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1082 385 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 385 - -
Lja6g1082 385 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 143 IPR016181 -
Lja6g1082 385 CDD NAT_SF 57 120 - -
Lja6g1082 385 Pfam Acetyltransferase (GNAT) family 47 144 IPR000182 GO:0016407
Lja6g1082 385 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 385 - -
Lja6g1082 385 Gene3D - 2 152 - -
Lja6g1082 385 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 212 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1082 Lja-Chr6 26734368 26735681 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja6g1082 Acetyltransf_1 1.3e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1082 - - gmx:100799507 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1082 6 26734368 26735681 Lja6g1082 6 26734368 26735681 ECH