Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1074 ATGGCTGCTGAGAAAGGTGCTAGATTTTCCTCCATTAGCATACCTCTTCTAGGTGATGAAAAAGTTCAACAAGTGAATGATTCAAATGGAGATTTGGTAGCCAAAACTGGTGATCATGTGGGTAATGCCTCCTTATTCAAGACTTGCTTCCATCTTGTTAATGCCATCTCAGGAGTTGGTATTGTATCCATACCTTATGCACTGGCTTCTGGGGGATGGTTAAGTCTGTTGCTTCTATTACTAATTGCCATTGCTTGCTGTTACACTGGTACATTGGTCAAAAGATGCATGGACATGGATCCTGAGATCAAGACCTTTTCTGACATAGGTCAACATGCATTTGGAGACATAGGGAGACTATTGGTATCAATCACCATGAACTCTGAGCTCTACCTAGCTGTTACAGGTTTTCTGATTTTAGAAGGGGACAATCTGAACAAACTAGTACCAAACTTGCAACTTGAAATTGCAGGGTTAACAATTGGTGGCACAGCAATTTTTACCATAATTGCTGCCCTTATTATTTTGCCTACTGTTTTGTTGGAGGACATGAGCGTGTTATCTTATATCTCTGTTAGTGGGGCTTTGGCTTCCACCATCTTTCTCTTGTCTCTGTTGTGGAATGGAGCAATTGATGGAACAGGATTTCATGGAAAGGGAACACTTCTCAGATGGAGTGGAATACCTTCTGCTGTTAGTCTTTATGCCTTTTGTTACAGTGCGCATCCCATCCTTCCCACCCTCTACAATTCTATGAGGAACAAAAGTCATTTCTCTAGTGTCCTGTTTATATGCTTCCTAGCATGCACTCTTAATTATGCAGCAGCAGCTATTTTGGGCTACTTAATGTTCGGAGAAGAGGTTGAATCACAGGTGACTCTGAACCTCCAAGCAGGAAAGCTGAGTGCACGTGTGGCCATATACACTACCTTGGTCAATCCCATAACCAAATATGCATTGATGCTCACTCCAATCATAAATGCCATAAAAAACAAGCTTTCATGCCATCACAACAACAGAAGGCTCGCACATGTTCTTATCAGCACCTCTTTGCTATTAAGCTCTCTTATTGTAGCTGTGGCCATTCCCTTATTTGGTTACCTCATGTCACTGGTTGGAGCATTACTAAGTGTCACTGCTTCAATTTTAGTGCCATCAGTGTGCTACTTGAAGATTTCAGGAGCTTACATGAGATTTGGGTCTGAAATGATCATCAACTATGCAATCATAGTAATGGGGTTTACTATTGCTACTGTAGGTACTTACAGATCTGTAGTAGATATAATTCAGAATTTGTAA 1299 0.4103 MAAEKGARFSSISIPLLGDEKVQQVNDSNGDLVAKTGDHVGNASLFKTCFHLVNAISGVGIVSIPYALASGGWLSLLLLLLIAIACCYTGTLVKRCMDMDPEIKTFSDIGQHAFGDIGRLLVSITMNSELYLAVTGFLILEGDNLNKLVPNLQLEIAGLTIGGTAIFTIIAALIILPTVLLEDMSVLSYISVSGALASTIFLLSLLWNGAIDGTGFHGKGTLLRWSGIPSAVSLYAFCYSAHPILPTLYNSMRNKSHFSSVLFICFLACTLNYAAAAILGYLMFGEEVESQVTLNLQAGKLSARVAIYTTLVNPITKYALMLTPIINAIKNKLSCHHNNRRLAHVLISTSLLLSSLIVAVAIPLFGYLMSLVGALLSVTASILVPSVCYLKISGAYMRFGSEMIINYAIIVMGFTIATVGTYRSVVDIIQNL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1074 432 Pfam Transmembrane amino acid transporter protein 42 424 IPR013057 -
Lja6g1074 432 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 1 430 - -
Lja6g1074 432 PANTHER OS05G0424000 PROTEIN-RELATED 1 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1074 Lja-Chr6 26074076 26079832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1074 38 429 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.592 1.56e-154 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1074 K15015 - gmx:100784690 612.068