Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1039 ATGTCATCCTCCTCTTCAATCTTCTCATTCTCTCTTGTTCTCATTCTACTTCTCCACGTTCAACCTTCATCACCATTCTCCCTCTCCGTCGAGAATCACCAAGAGGATATCATACTCTCACCCAACCGCGCATTCACCGCAGGCTTCTACCCCGTCGGCGAAAATGCCTACTGCTTCGCCATCTGGTTCACCCAACAACACCGCCAATCCGCAACCGTCGTCTGGATCGCCAACCGCGACCAACCCGTCAACGGAAAACGCTCCTCCCTCTCCCTTCTCAAAACCGGCAACCTCATCCTAACCGACGCCGACCAGTTCACCGTCTGGTCCACCAGCACCGCCTCGTTAAACTCGCCGGAGGTGGAACTTCTCGACACCGGTAACCTCGTCCTCCGTGACCGCCGCCGCAATGAAACCACCTCCATCCTCTGGCAGAGCTTCGATTTTCCGACGGATACTCTGCTTCCAGAACAGAGCCTCACCAGACACATGAAGCTCGTTTCTGCACGCAGTGCCGGTAACTTCTCCTCCGGATTCTACCAGCTTTTCTTCGACGACGATAACATTCTCCGTCTTCTCTACGAAGGACCGAGAATCTCCAGCGTTTACTGGCCGGATCCATTTCACTCCTCCGATAACTTCACCATGAAAGCGTGCGACTACGGCACCGTCCTCCAGCGGCGAGTCACCCTCGACCACGACGGTAACGTCCGTGTCTACAGCCGCAACGACGGTGAATCAGAGTGGTCGGTTTCAGCGCAGATTCAGCAAGAACCGTGCTTCATTCACGGGATCTGTGGTCCTAACAGCATTTGCAGTTACGATACCAGATCTGGGAGAAAATGCTCTTGCATTCCAGGGTATAGCTGGATCAACAATCAGGATTGGACACAAGGTTGCAAACCGAATTTCCAACGCTCTTGCAACAGATCTGAACACACGTTTGCGATTGAAAATGGTTTGTTTTGGTGCTACCCCAAGACGCAGTTGCTGAATGGGCACAGATCAGAGAGTTTCATTGGATCTTTCTTTGTGCCGTTGCCGAGAAGCACTGATAACAGCCTCAATGAGCGTAACAGCTTGGTTTGTTCGAGAAATGTGGCGACGGAGCAGCTTGAGAGAGCGTATGTAAAAGGAAAGGACAATGGATCTGTGAAATTTGTGCTCTGGTTTGCGAGTGGTATTGGAGGATTTGAGCTTGTGTGCTTCCTTCTGGTGTGGTGTTTCTTGTTTAGGGATAGCGGCGGAGACGAACAAGGGTATGTTCTTGCGGCGGCGACCGGGTTTCAGAGATTCGGTTACTCTGAGCTGAAGAAAGCTACGAAAGGTTTCAGCCAAGAGATTGGAAGGGGTGCAGGAGGAACTGTGTATAAGGGTGTGTTATCGGATAATCGCGTTGCGGCGATTAAGGTGTTGCACGCTGCGAATCAAGGAGAGAGTGAGTTCCTTGCTGAAGTGGGATTCATTGGAAGGCTTAACCACATGAACTTAATTGGAATGTGGGGGTATTGTGCCGAGGGGAAGCACAGGATTTTGGTGTATGAGTTCATGGAAAACGGTACATTAGCTAAGAATTTGTCATCAAATGCACTTGATTGGAGTAAGAGGTATAACATTGCTCTGGGAACGGCAAGGGGTTTGGCCTATCTACATGAAGAATGCTTGGAGTGGATTTTGCATTGTGACATAAAGCCCCAAAACATACTTCTTGACGCGAATTACCAACCCACGGTTGCGGATTTTGGCTTGTCTAAGCTGCTGCAAAGGGATGATCTGAACAATTCGAGCTTCTCAAGGATAAGAGGAACAAGAGGTTACATGGCACCCGAATGGGTTTTCAACTTGCCCATTACTTCGAAGGTGGATGTTTATAGCTATGGAATTGTTGTCCTGGAGATGATAACCGGAAAGAGCCCAATGACGGGTATCATCCAAATCTCAGAGGGAGCAGAACCACATCACGAGAGGTTGGTGACGTGGGTGAGGGAGAAGAAGAGGAGTGGAGCAAAAGGGGCATCTTGGGTGGAACAAGTTGTTGATCCTGCATTGGGGAAAAATTATGACATGAATAAAATGGAGATTTTGGCAACGGTGGCTTTGGAGTGTGTAGCGGAAGACAAGGATATGAGACCCAGCATGAGTCAAGTTTATCAGAGGCTCCAGGCCGGGTCTTAA 2175 0.4979 MSSSSSIFSFSLVLILLLHVQPSSPFSLSVENHQEDIILSPNRAFTAGFYPVGENAYCFAIWFTQQHRQSATVVWIANRDQPVNGKRSSLSLLKTGNLILTDADQFTVWSTSTASLNSPEVELLDTGNLVLRDRRRNETTSILWQSFDFPTDTLLPEQSLTRHMKLVSARSAGNFSSGFYQLFFDDDNILRLLYEGPRISSVYWPDPFHSSDNFTMKACDYGTVLQRRVTLDHDGNVRVYSRNDGESEWSVSAQIQQEPCFIHGICGPNSICSYDTRSGRKCSCIPGYSWINNQDWTQGCKPNFQRSCNRSEHTFAIENGLFWCYPKTQLLNGHRSESFIGSFFVPLPRSTDNSLNERNSLVCSRNVATEQLERAYVKGKDNGSVKFVLWFASGIGGFELVCFLLVWCFLFRDSGGDEQGYVLAAATGFQRFGYSELKKATKGFSQEIGRGAGGTVYKGVLSDNRVAAIKVLHAANQGESEFLAEVGFIGRLNHMNLIGMWGYCAEGKHRILVYEFMENGTLAKNLSSNALDWSKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDANYQPTVADFGLSKLLQRDDLNNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKSPMTGIIQISEGAEPHHERLVTWVREKKRSGAKGASWVEQVVDPALGKNYDMNKMEILATVALECVAEDKDMRPSMSQVYQRLQAGS* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1039 724 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 205 IPR036426 -
Lja6g1039 724 Pfam Protein kinase domain 445 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1039 724 PIRSF SRK 323 724 IPR024171 GO:0004674
Lja6g1039 724 PIRSF SRK 206 339 IPR024171 GO:0004674
Lja6g1039 724 PIRSF SRK 1 219 IPR024171 GO:0004674
Lja6g1039 724 Pfam D-mannose binding lectin 72 165 IPR001480 -
Lja6g1039 724 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 208 309 - -
Lja6g1039 724 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 7 208 - -
Lja6g1039 724 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 308 722 - -
Lja6g1039 724 Gene3D - 29 148 IPR036426 -
Lja6g1039 724 ProSiteProfiles Protein kinase domain profile. 442 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1039 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Lja6g1039 724 ProSitePatterns Protein kinases ATP-binding region signature. 448 470 IPR017441 GO:0005524
Lja6g1039 724 SMART serkin_6 442 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1039 724 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Lja6g1039 724 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 208 309 - -
Lja6g1039 724 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 7 208 - -
Lja6g1039 724 CDD B_lectin 38 150 IPR001480 -
Lja6g1039 724 SUPERFAMILY Protein kinase-like (PK-like) 426 720 IPR011009 -
Lja6g1039 724 Gene3D Phosphorylase Kinase; domain 1 416 516 - -
Lja6g1039 724 SMART blect_4 29 150 IPR001480 -
Lja6g1039 724 CDD STKc_IRAK 448 721 - -
Lja6g1039 724 Gene3D Transferase(Phosphotransferase) domain 1 517 724 - -
Lja6g1039 724 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 308 722 - -
Lja6g1039 724 Pfam S-locus glycoprotein domain 224 289 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1039 Lja-Chr6 24345823 24348172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1039 432 720 Trihelix Transcription Factor Family AT5G38560 42.712 4.75e-68 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lja6g1039 Pkinase 5.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1039 - - gmx:100806357 987.252