LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja6g1038	ATGGCTTCTACAATTTTCCAATTCCCTCTTCTTCTCTTTTTGCTTTTCCTGCATGTAAAACATTCTTCATCATTCTCCCTCTCAGTGGAGAAACACCAAGAAGATGTTATAGTCTCACCAAACCACACATTCACAGCAGGCTTCTACCCCGTAGGAGAAAACACATACTACTTCGCCATATGGTTCACCCAACCACCTCACCAAAACCTCCAAAACGCCACCGTCGTTTGGATTGCAAACCGTGACCAACCGGTGAACGGAAAACGCTCCACCCTCTCCCTTCTCAAAACCGGCAACGTCATCTTAACCGACGCCGAAACCGGAAACCTTGTTCTTCAAAAGCAGAATGATCAAAATCATGTTCTGTGGCAGAGCTTTGATTTTCCAACAAACACTCTCCTTCCTGGTCAGATTTTCACGAAGAACACGAAGCTGGTTTCTTCAAGAAGTGAAACCAACCATTCCTCTGGATTCTACAACCTCTTCTTCGACGGCGATAATCTTCTCCGCCTTCTCTACGACGGCCCTTATGTTTCTAGTGTTTACTGGCCAGACCCCACGCTTGTGAGCTGGGAAGCTGGTAGATCCACGTACAATAGTAGCAGGGTTGCGATGCTAGATCACTTCGGAAACTTCAGATCCTCTGATGATTTCTTTCTGACAACATCAGATTACGGAACAGTTCTCCAACGAAGACTTAAAATGGACCATGATGGGAATGTTCGTGTTTACAGCCGCAAAGATGGAAAAACAGAGTGGTTTGTGTCAGGGCAGTTTCATCAACAACCTTGTCAGATTCATGGGATTTGTGGACCCAATAGTCTTTGCAGTAATAACCCAATTGCTGGAAGAAAATGCTCGTGTCTACCAGGGTATAGCAGGATCAGTGATGAAGATTGGTCTCAAGGTTGCAAACCAAATTTTCAATTTTCATGCCTTAGCAAAACAGAGTCTCGCTTCCTGTTCTTACCCGGTGTTGATTTTTATGGATATGATTGTGGTTTCTTCCGAAATTACACCTATAAGCAGTGTGAGAAGCTCTGCTTGCAATTGTGCAAATGCACAGGCTTCCAGTACAAGAAGGGGGATGGTGTGTTTAAGTGTTATCCCAAGACACAGATGTTGAATGGTTTTACTTCACCAGCTTTCATTGGATCAATCTTCTTGCGATTGCCCAAAAATATAAACTTTTCCTATGAGAATCCCGAGGAAGACAATAACTTGGTTTGCTCAAGTAATAAAGGAGAGCAATTGAAAAGATTGTACGTGAATGGCAAGGAAAATGGATCGGTGAAGTTCATGCTTCGGTTTGCGAGTGTCTTTGGAGGAGTTGAGTTTATGTGCTTCTTTCTGGTGTGGTGTTTCTTAATTAGGAAGAGAAAGAGGTTTGGTGGAGACACTCAAGGCTATGTTCTTGCAGTAGCAACAGGATTTCAGAGATTCAATTACTCTGAACTGAAAAAAGCTACAAAGGGTTTTAGCCAAGAGATTGGAAGAGGTGCTGGAGGAATTGTGTATAAGGGTGTGTTGTCAGATGATAGAGTTGCAGCGATAAAGGTGCTACATGCAGCGAACCAAGGAGAGAGTGAGTTTCTTGCTGAAGTGAGCTTCATTGGAAGGCTTAACCACATGAACTTAATTAGCATATGGGGTTATTGCGCTGAGGGAAAGCATAGGGTTTTGGTGTATGAGTACATGGATAATGGTTCTTTAGCTGAGAATCTCTCATCAAATGCACTAGCACTTGATTGGGGTAAGAGGTATAACATTGCTCTAGGAACAGCAAGGGGTTTGGCCTACTTACATGAAGAATGCTTGGAGTGGATTTTGCATTGTGACATAAAGCCCCAAAACATACTTCTTGACTTTGATTACGAGCCCAAAGTCTCCGATTTTGGCTTATGTAAACTACTACAAAGGAACAATCTGGACAACTCAAGCTTCTCAAGGATAAGAGGAACAAGAGGCTACATGGCTCCAGAGTGGGTTTTTAACTTTCCCATCACTTCGAAGGTGGATGTTTATAGCTATGGAATTGTTGTCTTGGAGATGATAACTGGAATGAGTTCAATGACGGGTATCCAAATCTCAAATGGAGTAGAATCACATCACGAGAGGTTGGTACCGTGGGTGAGGGAGAAGAGGAAGAATGGAACAGAAGGGGCATCTTGGGTGGAAGAAATCGCCGACTCTGCATTGGAAACAAACTATGACATGGATGAAATGGAGGTTTTGGCAACGGTGGCTTTGGAATGTGTAGCAGAAGAGAAAGACATGAGACCCAGTATGAGACAAGTGGCTCGGAGGCTCCAGAGTCATCAACGTGATTCTTGA	2334	0.4349	MASTIFQFPLLLFLLFLHVKHSSSFSLSVEKHQEDVIVSPNHTFTAGFYPVGENTYYFAIWFTQPPHQNLQNATVVWIANRDQPVNGKRSTLSLLKTGNVILTDAETGNLVLQKQNDQNHVLWQSFDFPTNTLLPGQIFTKNTKLVSSRSETNHSSGFYNLFFDGDNLLRLLYDGPYVSSVYWPDPTLVSWEAGRSTYNSSRVAMLDHFGNFRSSDDFFLTTSDYGTVLQRRLKMDHDGNVRVYSRKDGKTEWFVSGQFHQQPCQIHGICGPNSLCSNNPIAGRKCSCLPGYSRISDEDWSQGCKPNFQFSCLSKTESRFLFLPGVDFYGYDCGFFRNYTYKQCEKLCLQLCKCTGFQYKKGDGVFKCYPKTQMLNGFTSPAFIGSIFLRLPKNINFSYENPEEDNNLVCSSNKGEQLKRLYVNGKENGSVKFMLRFASVFGGVEFMCFFLVWCFLIRKRKRFGGDTQGYVLAVATGFQRFNYSELKKATKGFSQEIGRGAGGIVYKGVLSDDRVAAIKVLHAANQGESEFLAEVSFIGRLNHMNLISIWGYCAEGKHRVLVYEYMDNGSLAENLSSNALALDWGKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDFDYEPKVSDFGLCKLLQRNNLDNSSFSRIRGTRGYMAPEWVFNFPITSKVDVYSYGIVVLEMITGMSSMTGIQISNGVESHHERLVPWVREKRKNGTEGASWVEEIADSALETNYDMDEMEVLATVALECVAEEKDMRPSMRQVARRLQSHQRDS*	778

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja6g1038	777	Pfam	Protein kinase domain	494	766	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lja6g1038	777	Pfam	D-mannose binding lectin	106	145	IPR001480	-
	Lja6g1038	777	PIRSF	SRK	1	777	IPR024171	GO:0004674
	Lja6g1038	777	SMART	blect_4	28	129	IPR001480	-
	Lja6g1038	777	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	9	776	-	-
	Lja6g1038	777	SMART	serkin_6	491	750	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lja6g1038	777	Gene3D	Transferase(Phosphotransferase) domain 1	566	777	-	-
	Lja6g1038	777	Gene3D	-	130	257	IPR036426	-
	Lja6g1038	777	ProSiteProfiles	PAN/Apple domain profile.	312	392	IPR003609	-
	Lja6g1038	777	SUPERFAMILY	alpha-D-mannose-specific plant lectins	75	147	IPR036426	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja6g1038	Lja-Chr6	24324016	24326685	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja6g1038	481	772	Trihelix Transcription Factor Family	AT5G38560	41.554	1.90e-62	220

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Lja6g1038		Pkinase	3.9e-49	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja6g1038	-		-	gmx:100808940	1013.45

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