Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1038 ATGGCTTCTACAATTTTCCAATTCCCTCTTCTTCTCTTTTTGCTTTTCCTGCATGTAAAACATTCTTCATCATTCTCCCTCTCAGTGGAGAAACACCAAGAAGATGTTATAGTCTCACCAAACCACACATTCACAGCAGGCTTCTACCCCGTAGGAGAAAACACATACTACTTCGCCATATGGTTCACCCAACCACCTCACCAAAACCTCCAAAACGCCACCGTCGTTTGGATTGCAAACCGTGACCAACCGGTGAACGGAAAACGCTCCACCCTCTCCCTTCTCAAAACCGGCAACGTCATCTTAACCGACGCCGAAACCGGAAACCTTGTTCTTCAAAAGCAGAATGATCAAAATCATGTTCTGTGGCAGAGCTTTGATTTTCCAACAAACACTCTCCTTCCTGGTCAGATTTTCACGAAGAACACGAAGCTGGTTTCTTCAAGAAGTGAAACCAACCATTCCTCTGGATTCTACAACCTCTTCTTCGACGGCGATAATCTTCTCCGCCTTCTCTACGACGGCCCTTATGTTTCTAGTGTTTACTGGCCAGACCCCACGCTTGTGAGCTGGGAAGCTGGTAGATCCACGTACAATAGTAGCAGGGTTGCGATGCTAGATCACTTCGGAAACTTCAGATCCTCTGATGATTTCTTTCTGACAACATCAGATTACGGAACAGTTCTCCAACGAAGACTTAAAATGGACCATGATGGGAATGTTCGTGTTTACAGCCGCAAAGATGGAAAAACAGAGTGGTTTGTGTCAGGGCAGTTTCATCAACAACCTTGTCAGATTCATGGGATTTGTGGACCCAATAGTCTTTGCAGTAATAACCCAATTGCTGGAAGAAAATGCTCGTGTCTACCAGGGTATAGCAGGATCAGTGATGAAGATTGGTCTCAAGGTTGCAAACCAAATTTTCAATTTTCATGCCTTAGCAAAACAGAGTCTCGCTTCCTGTTCTTACCCGGTGTTGATTTTTATGGATATGATTGTGGTTTCTTCCGAAATTACACCTATAAGCAGTGTGAGAAGCTCTGCTTGCAATTGTGCAAATGCACAGGCTTCCAGTACAAGAAGGGGGATGGTGTGTTTAAGTGTTATCCCAAGACACAGATGTTGAATGGTTTTACTTCACCAGCTTTCATTGGATCAATCTTCTTGCGATTGCCCAAAAATATAAACTTTTCCTATGAGAATCCCGAGGAAGACAATAACTTGGTTTGCTCAAGTAATAAAGGAGAGCAATTGAAAAGATTGTACGTGAATGGCAAGGAAAATGGATCGGTGAAGTTCATGCTTCGGTTTGCGAGTGTCTTTGGAGGAGTTGAGTTTATGTGCTTCTTTCTGGTGTGGTGTTTCTTAATTAGGAAGAGAAAGAGGTTTGGTGGAGACACTCAAGGCTATGTTCTTGCAGTAGCAACAGGATTTCAGAGATTCAATTACTCTGAACTGAAAAAAGCTACAAAGGGTTTTAGCCAAGAGATTGGAAGAGGTGCTGGAGGAATTGTGTATAAGGGTGTGTTGTCAGATGATAGAGTTGCAGCGATAAAGGTGCTACATGCAGCGAACCAAGGAGAGAGTGAGTTTCTTGCTGAAGTGAGCTTCATTGGAAGGCTTAACCACATGAACTTAATTAGCATATGGGGTTATTGCGCTGAGGGAAAGCATAGGGTTTTGGTGTATGAGTACATGGATAATGGTTCTTTAGCTGAGAATCTCTCATCAAATGCACTAGCACTTGATTGGGGTAAGAGGTATAACATTGCTCTAGGAACAGCAAGGGGTTTGGCCTACTTACATGAAGAATGCTTGGAGTGGATTTTGCATTGTGACATAAAGCCCCAAAACATACTTCTTGACTTTGATTACGAGCCCAAAGTCTCCGATTTTGGCTTATGTAAACTACTACAAAGGAACAATCTGGACAACTCAAGCTTCTCAAGGATAAGAGGAACAAGAGGCTACATGGCTCCAGAGTGGGTTTTTAACTTTCCCATCACTTCGAAGGTGGATGTTTATAGCTATGGAATTGTTGTCTTGGAGATGATAACTGGAATGAGTTCAATGACGGGTATCCAAATCTCAAATGGAGTAGAATCACATCACGAGAGGTTGGTACCGTGGGTGAGGGAGAAGAGGAAGAATGGAACAGAAGGGGCATCTTGGGTGGAAGAAATCGCCGACTCTGCATTGGAAACAAACTATGACATGGATGAAATGGAGGTTTTGGCAACGGTGGCTTTGGAATGTGTAGCAGAAGAGAAAGACATGAGACCCAGTATGAGACAAGTGGCTCGGAGGCTCCAGAGTCATCAACGTGATTCTTGA 2334 0.4349 MASTIFQFPLLLFLLFLHVKHSSSFSLSVEKHQEDVIVSPNHTFTAGFYPVGENTYYFAIWFTQPPHQNLQNATVVWIANRDQPVNGKRSTLSLLKTGNVILTDAETGNLVLQKQNDQNHVLWQSFDFPTNTLLPGQIFTKNTKLVSSRSETNHSSGFYNLFFDGDNLLRLLYDGPYVSSVYWPDPTLVSWEAGRSTYNSSRVAMLDHFGNFRSSDDFFLTTSDYGTVLQRRLKMDHDGNVRVYSRKDGKTEWFVSGQFHQQPCQIHGICGPNSLCSNNPIAGRKCSCLPGYSRISDEDWSQGCKPNFQFSCLSKTESRFLFLPGVDFYGYDCGFFRNYTYKQCEKLCLQLCKCTGFQYKKGDGVFKCYPKTQMLNGFTSPAFIGSIFLRLPKNINFSYENPEEDNNLVCSSNKGEQLKRLYVNGKENGSVKFMLRFASVFGGVEFMCFFLVWCFLIRKRKRFGGDTQGYVLAVATGFQRFNYSELKKATKGFSQEIGRGAGGIVYKGVLSDDRVAAIKVLHAANQGESEFLAEVSFIGRLNHMNLISIWGYCAEGKHRVLVYEYMDNGSLAENLSSNALALDWGKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDFDYEPKVSDFGLCKLLQRNNLDNSSFSRIRGTRGYMAPEWVFNFPITSKVDVYSYGIVVLEMITGMSSMTGIQISNGVESHHERLVPWVREKRKNGTEGASWVEEIADSALETNYDMDEMEVLATVALECVAEEKDMRPSMRQVARRLQSHQRDS* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1038 777 Pfam Protein kinase domain 494 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1038 777 Pfam D-mannose binding lectin 106 145 IPR001480 -
Lja6g1038 777 PIRSF SRK 1 777 IPR024171 GO:0004674
Lja6g1038 777 SMART blect_4 28 129 IPR001480 -
Lja6g1038 777 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 776 - -
Lja6g1038 777 SMART serkin_6 491 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja6g1038 777 Gene3D Transferase(Phosphotransferase) domain 1 566 777 - -
Lja6g1038 777 Gene3D - 130 257 IPR036426 -
Lja6g1038 777 ProSiteProfiles PAN/Apple domain profile. 312 392 IPR003609 -
Lja6g1038 777 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 147 IPR036426 -
Lja6g1038 777 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 9 776 - -
Lja6g1038 777 CDD PAN_AP_plant 311 392 - -
Lja6g1038 777 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Lja6g1038 777 Gene3D - 28 129 IPR036426 -
Lja6g1038 777 SUPERFAMILY Protein kinase-like (PK-like) 474 770 IPR011009 -
Lja6g1038 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Lja6g1038 777 Gene3D Phosphorylase Kinase; domain 1 459 565 - -
Lja6g1038 777 ProSiteProfiles Bulb-type lectin domain profile. 22 160 IPR001480 -
Lja6g1038 777 Pfam S-locus glycoprotein domain 218 294 IPR000858 GO:0048544
Lja6g1038 777 CDD STKc_IRAK 497 771 - -
Lja6g1038 777 ProSiteProfiles Protein kinase domain profile. 491 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1038 Lja-Chr6 24324016 24326685 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1038 481 772 Trihelix Transcription Factor Family AT5G38560 41.554 1.90e-62 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lja6g1038 Pkinase 3.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1038 - - gmx:100808940 1013.45