Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1031 ATGACTAGGGTATTCCCAGCACAGCGTTTGCTGCAAACGCCCAATGGATGGAACCAGCACGTTAATCCTTCACGTGTTCTTCAAGAATACATGAACAGCTCGATTAACGTGTCTGGAACTCCAATTAACATTGTGTGTGAGGCAGCCATTGAGGTTCCTAATGTTGGCATCTTTCTTGGTGACAATCCTTTAAAACACTCCTTCTCACTGGTGTTGTTCAACCTCCTTCTCGTCACCACCATCACTCGCATTGTTCGCTTTCTTCTCAAGCCTCTCAGACAACCTAAAATCATTTCTCAGATCATAGGTGGTGTTATTGTTGGACCTTCCTTTCTAGGACGCTATAGGTGGTATCAACGTCACATTAAACCTGAGTCAACCCAATACCTGATAAACAATCTTGGAGTGATTGGATTCATGTACTTCGTCTTCGTTTATGGGGTGAAGATGGATCCAGGCCTTTTGAAAAAATCAGGAAAATTGCATGTATCTACAGCAATGTTTGGTATAAGTATTCCCACAATAGCAGTGTTGGTTGTGGCGCTAGTTATGAGAAAGGAGATGTATAAGGACTTAGCTGCACTTTCTTCAGTTGGAATACTTGCAGGGTACTTAGGGATCACAGCATTCCCTGTTCTCTTCAATATCCTTAGAGAGCTTAACCTTCTAAACTCTGATGTGGGGCGAATAGCATTGTCGACAGCATTGATTGGTGATGCATTGGGAGTGTTCACAATCATAGCATTTGAGGCAGGAAGACAAGGAGAAACAAGAGCTGGAAATGCATTGTGGTACATGATTGCTTGTGTGATTATGTCAGTGGTAGTTGTGTTTTGTATTAGGCCAGCAATGGTTTGGATCAATAAGAAAACCCCAGAAGGCCACCCAGTTGATGAGTGTTTTGTGGTTGCCATTCTTTTAGGGGCTTTTGTGATGGGCTTTCTCACTGACATGTTTGGGATAGCAATTGTGAATGGGTCCTTGTGGTTGGGCTTGGTGGTTCCTGAGGGGCCTCCTTTAGGAGCAACACTAGTGCAGAAGAGCAAGACCATTATGACAGACTTCTTCATGCCATTTGCATTCACAATGGTGGGGCATTATACTGATATTTTCAGATTGAGGGCTACTGAATGGTCAACTTTGGAACCGTTGTTTCTCATGGTTTTAATAGGATACTTGGCCAAATTCTTTTCCACTTGGCTGGCCACATTCTACTGGCAGATGCCATTCAGAGATGGACTAACCCTCAGCCTAATTATGAGTTTGAGAGGCCAAGTTGAACTTATATTGTTTGTGCATTTGATGGACAAAAAGGTCTTGAGGGTACCAGGATTCACACTATTGGTGATCATGACAACAATATTGACTGCAACATTCACTCCTCTGATCTCCATATTGTATGATCCAACAAGGCCATACATGGTAAGCCAAAGGAGGAACCTCCAACACAATCCCCCAGACCAAGAACTTAGAATAGTGTTATGTGTTCTTGACCCTGATGAAACCGTGAGTGGCCTAATTTATCTACTTGACATCACATGTCCAAGCACAAACAGCCCTCTTTCAGTTTGTGCTCTCAGATTAATCCATCTCGTAGGTCGCGCTACCCCATTGTTCATAGACCATTCAAAACAAGAAGTGCCTCAAGTTTACCATTGGACACACACCATCCACGCCCTTGAACAATTCCAAGAAATTAAAGGAGAACAAGTGAAGCTCCAATTTTTCACTGCTGTGGCCCCAAAACATACAATGTTCCAAGATATTTGTGAGGTTTCTCTTGAACATGGAGCTTCTTTAATCATCTTACCTTTTAAAAGGGTAGGCCATCATAATCATGGAGTCAAGACAGTGAACTCACAAGTACTAAATCATGCACCTTGCTCTATTGCAATTCTTGTTGACAAAGGACTTCTTGATCATGCCAACCCTGTAGGAAGTTCCTTTAGTCATTTTGGACTTAGATTAGCAGTGTTTTTCCTGGGAGGTGCAGATGCTAGAGAGGCTCTTGTTTATGCAGATAGAATGGTTTCCAACCAAGAGGTGTCCTTAACTGTGATACGGTTTCTCTCTCACAACAATATAGGAGACATTGAAATGGAGAAGAAGCTTGATGACGGAATTGTGACTTGGTTTTGGGTGAAGAATGAGATTAATCAAAGAGTGGTGTACAGAGAGGTTGTGGTTAGAAATGGGGAAGAAACAATTGGAGCTATTCAGTCTATGAATGATGGTGCTTTTGATCTTTTGATAGTGGGAAGGAAACAAGGGATAAACCCTGTCCTTCTTACCGGACTATCAGAATGGAGTGAAAATGAAGAGTTGGGACACATAGGAGATTATGTTGCATCTGAAGATTTTTCTGGCACATCTTCTGTTTTAGTAGTTCAACAACAGGTCTTAAGAGGGTGA 2412 0.4225 MTRVFPAQRLLQTPNGWNQHVNPSRVLQEYMNSSINVSGTPINIVCEAAIEVPNVGIFLGDNPLKHSFSLVLFNLLLVTTITRIVRFLLKPLRQPKIISQIIGGVIVGPSFLGRYRWYQRHIKPESTQYLINNLGVIGFMYFVFVYGVKMDPGLLKKSGKLHVSTAMFGISIPTIAVLVVALVMRKEMYKDLAALSSVGILAGYLGITAFPVLFNILRELNLLNSDVGRIALSTALIGDALGVFTIIAFEAGRQGETRAGNALWYMIACVIMSVVVVFCIRPAMVWINKKTPEGHPVDECFVVAILLGAFVMGFLTDMFGIAIVNGSLWLGLVVPEGPPLGATLVQKSKTIMTDFFMPFAFTMVGHYTDIFRLRATEWSTLEPLFLMVLIGYLAKFFSTWLATFYWQMPFRDGLTLSLIMSLRGQVELILFVHLMDKKVLRVPGFTLLVIMTTILTATFTPLISILYDPTRPYMVSQRRNLQHNPPDQELRIVLCVLDPDETVSGLIYLLDITCPSTNSPLSVCALRLIHLVGRATPLFIDHSKQEVPQVYHWTHTIHALEQFQEIKGEQVKLQFFTAVAPKHTMFQDICEVSLEHGASLIILPFKRVGHHNHGVKTVNSQVLNHAPCSIAILVDKGLLDHANPVGSSFSHFGLRLAVFFLGGADAREALVYADRMVSNQEVSLTVIRFLSHNNIGDIEMEKKLDDGIVTWFWVKNEINQRVVYREVVVRNGEETIGAIQSMNDGAFDLLIVGRKQGINPVLLTGLSEWSENEELGHIGDYVASEDFSGTSSVLVVQQQVLRG* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1031 803 PANTHER CATION/H + ANTIPORTER 43 802 - -
Lja6g1031 803 Pfam Sodium/hydrogen exchanger family 77 462 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja6g1031 803 Gene3D - 69 471 IPR038770 -
Lja6g1031 803 PANTHER CATION/H(+) ANTIPORTER 24-RELATED 43 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1031 Lja-Chr6 24102981 24106648 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1031 42 800 Antiporter Super Family AT5G37060 43.073 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1031 - - gmx:100783296 1008.82