Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1027 ATGGCTGATAAGCCAGAACAAGAAAAGCTAGATCAGTTGAGTTCCTATGGAAATATTGGAATGGAGCCAATAGTATGTCAATATATTGATCGAAGCCGCTCAACCAATGGCATATTTCTTGGGGACAATCCCCTCCATAATCCCACATCCATACTAGTAATTCAAATTATTCTTATATTTATTGTCGGTAAAATTACTCATCTCCTGCTGAGACCACTTCATCCAATACAACTCGTTTCACAAATAGTGGCTGGTATCATATTAGGTCCATTATTGCTTGGTAGACTCCAAGCAGGTTATGAGTTGATGTTTCCATCAATGAGCATAGTGACACTTACAACATTTGCAGAATTTGGCATGATAATTTACTTCTTCAAGATAGGGGTGCAGATCAATCCCAAACATATATTTAATATTGGAAAGCATGCAAAAATAATTGGTTTAGTAGGCCATGTGTCTTCTATAGCAGTTGGCGCTCTAGTTTTTATTATGGTTGGAGGAGTCTCATCTCTAAAGTCTGAAGCGAATGGTGTTAGAGGTTTGGTAATTTTTGATGCTTTGACTGCATTTCCTGCTACAAGTAGCTTTCTCAAAGAGATGAATATTCTTAATTCAGAAATTGGACGCATGGCATTATCTGCTTCCATGGTTAGTGATAAATGCACGTGGTTTTTAATATTTGTTGTAATCAGCAGTATTGAATCCTTGGGACAAAAGTCAGTTATGCCTATTCTGACACTACTTGTGACAGTTTGTTATTTCGGCAGTTTATTCTTCATGCTAAGGCCCCTTGTTATATGGATCTCCCACCGCAATCCAAAGGGAAAGCATATGACGGGAGGTCATTACATGATAATCATGTTTATACTTTTTATTCTTGGATTGTCTGCACAAGTTGTTGGACAGCCTGCTTTTCTTGTTACGTTTTGGTTTGGCTTGATGTTGCCAGATGGCCCCCCGTTAGGTTCTGCTCTGGCAGAGAGGATTGATATTGTTGGTTCTACTTTGATTGTTCCAGCTTATTGTACTATATGTGGTTTGAGCACAATCGTTCCCCCTTTAACATCACAAGCAGGATGCATAGAGGCTGTCTTACTTGCCGGAAAAATAGGAAAGTTTGCAGGCACCATTTTATCCACACTTCACTTTCAAATTGAATTCTGGGATTCTGTTGCGTTGTCTCTAATCATGTGTTGCAAAGGCCTTGTAGATCTCTCCCTCTACACCTATTTATTAAAAAGAAAGGACCTTGGGAGACTGTCTTACACTATTGTCATATATACCATGGTAGGTGTAACCGGATTTGCAACTCTAGTTATTTATTACATATATGATCCTTCAAAGATATACAGAAACTACATTAGAAAATCAGTAAAGGACCACAAGGACCACGAATTCAAATTGCTTGTATGTGTCCACAATGAAGAAAACGTATATCCATTGGTCAACCTTCTCGAAGCATTTAATCCCTCAAAGGAGACACCGTTGTCACTCTTTGTTCTCCATCTCATGGAGCTCTCAGGCAGAGCAGCCCCAGTCCTTACAAAAAGCGAGACCACTAACAAGTTACATCCACATGGAGATGCTTCCTCTCAACACATAAACAAAAGTATCATGTTGCAGTTCTTTACTGCAATTGCACCATTTGCAAGCATTCACGATGACATATGCTACCTTGCAATGGATACAAAATCACATTTTGTGATCATACCATTTCATAAGCGATGGTCCATTAATGGAAATATTGAGGTTTCCAACGCTTCAATCAGGACAATAAACCAGAAAGTTCTTAGTAAAGCTCCTTGTTCAGTTGGAGTCTTAATTGACAGAAGCAATATGAGTGGAAAACTATTAGTTACATATGATAAGTCATTCTGTGAAATTGCCATGATCTTCTTAGGCGGTGATGATGACCAAGAGGCACTGGCTTTTAGTTTGCAAATGGCTCAACATCCAAATATCAGACTTACAATGTTTTGGGTAAGGGTTAACATGGAAGAAAAACAAAGGAATATGAAGAATCCTTTTATTTACTTGATGGAGCATATAAAGTATAATCTTAACCTTAAAGGCAAGGTGAACTTTAAGGAGGAGATTGTGGAAGATGGGATAGGAACAATACATGTTATCCGAACAATGGAGGGACATTTTAATTTGGTCATAGTGGGTAAACATCATATAATGGAGTCTCCATGCACGCTAGGCTTGACAGAATGGTGTGAACTCCCAGAGCTTGGATTAGTTGGGAACCTCCTAGCCTCAGATTTTACATTTTCAGTTTTGGTGGTGTAA 2292 0.3866 MADKPEQEKLDQLSSYGNIGMEPIVCQYIDRSRSTNGIFLGDNPLHNPTSILVIQIILIFIVGKITHLLLRPLHPIQLVSQIVAGIILGPLLLGRLQAGYELMFPSMSIVTLTTFAEFGMIIYFFKIGVQINPKHIFNIGKHAKIIGLVGHVSSIAVGALVFIMVGGVSSLKSEANGVRGLVIFDALTAFPATSSFLKEMNILNSEIGRMALSASMVSDKCTWFLIFVVISSIESLGQKSVMPILTLLVTVCYFGSLFFMLRPLVIWISHRNPKGKHMTGGHYMIIMFILFILGLSAQVVGQPAFLVTFWFGLMLPDGPPLGSALAERIDIVGSTLIVPAYCTICGLSTIVPPLTSQAGCIEAVLLAGKIGKFAGTILSTLHFQIEFWDSVALSLIMCCKGLVDLSLYTYLLKRKDLGRLSYTIVIYTMVGVTGFATLVIYYIYDPSKIYRNYIRKSVKDHKDHEFKLLVCVHNEENVYPLVNLLEAFNPSKETPLSLFVLHLMELSGRAAPVLTKSETTNKLHPHGDASSQHINKSIMLQFFTAIAPFASIHDDICYLAMDTKSHFVIIPFHKRWSINGNIEVSNASIRTINQKVLSKAPCSVGVLIDRSNMSGKLLVTYDKSFCEIAMIFLGGDDDQEALAFSLQMAQHPNIRLTMFWVRVNMEEKQRNMKNPFIYLMEHIKYNLNLKGKVNFKEEIVEDGIGTIHVIRTMEGHFNLVIVGKHHIMESPCTLGLTEWCELPELGLVGNLLASDFTFSVLVV* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1027 763 PANTHER CATION/H + ANTIPORTER 38 763 - -
Lja6g1027 763 PANTHER CATION/H(+) ANTIPORTER 14 38 763 - -
Lja6g1027 763 Gene3D - 50 448 IPR038770 -
Lja6g1027 763 Pfam Sodium/hydrogen exchanger family 54 433 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1027 Lja-Chr6 23994563 23997542 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1027 3 763 Antiporter Super Family AT1G06970 35.459 2.07e-160 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1027 - - gmx:100804488 922.924