Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1024 ATGGCAAACGAAACAGATCATGAAATGATAAATCAGCTGAGTTTCTATGGAAATATTGGCATTGATCAACTAGTTTGTCAATACATTGAGAAACACGGATCCAGGGGCATATATCTTGGGGATAATCCCCTCCATCACCCAACTACTATGCTAATGACTCAGATTATTCTTATATTCACTGTTGGTAGAATTGGTCATCTCTTGATGAAACCTTGTCATCAAATACAATTCATTTCACAGATTGTGGCCGGTATCATATTGGGTCCCTTATTGCTTGGTCGACTACATTCAGGTTATGAGTTGTTGTTTCCATTAGCAAGTAGAATGACACTTTCAACATTTGCTGAATTTGGAATGATAATTTACTTCTTCAAGATAGGGGTGCAGATAAATTACAAAAATTTCTTGAAGTTTGAAAAGCAGGCAATGGCTATTGGTTTAGTAGGCCAGTTGTCTTCTATATTACTTGGTACTGCAGTTTTCATTATTGTTAGTTCCTATTTGAAGACTGACTTGGAAGGTATTAGTGGCATTGTGGTTTTTTCTTCTTTGACCGCATTTCCTACTATAACTAGCTTCCTCAATGAGATGAACATCCTAAATTCAGAGATTGGGCGCATGGCAATATCTACTTCCTTGGTTAGTGATAAATGCACGTGGATTTTATTTTTTTTTGTAGTCAACAATGTTAAAGCTTTGCAACAACGGTCATTTATACCTGTTGTAGTGTTGGTTGGGACAATTTGTTATTTCACTACTCTATTCTTCTTGCTAAGGCCACTGGTTATATGGATCTCCCATCGCAATCCAAAGGGAAAGCCTATGACAGAAGGATATTTCTTAGCAATCTTGTTCATACTTCTATTTCTTGGATTATCTGCACAAGTGGCTGGACAACCTGCTTTCGTTATTGCTTTTTGGTTTGGCTTGATCTTGCCTGATGGTCCCCCATTAGGTTCTGTTTTGGCAGAAAGGATTGATACGATTGGTTCTACTTTAATTATTCCAGCTTACTGTACTATAAGTGGGTTGAGCACAATTGTTCCCCCATTAACATCAGAGGCAATATGCATAGAGGCTATCTTACTTGCAGGACTAGTAGGAAAGTTTGGAGGCACCATTATACCCTCACTTCACTTTAAGATTGATTTTTGGGATTCTATTGCTTTGTCTCTAATCATGTGCTGTAAAGGCCTTATAGATCTCGCCCTCTACACCTTATTATTTAAAAATAAGGACATTGGGGAACTGCCTTACACCCTTCTAATATATACTTTGGTGGGTGTAACTGGGTTTGCAACTATAGTTATTTATTACATATATGATCCTTCAAAGAGTTATATGAACTACACCAGAAAATCAATCAAGGACTCCCAGAAGGACCTTGAATTTAAAGTACTTGTCTGCATCTACAACGAAGAAAATGTGTATCCAATGATCAACCTTCTCCAAGCCTCTAACACTTCAAAGACTACACCACTTTCAGTCTTTATTCTACACCTTTTGGAGCTTGCTGGAAGGGCAGAACCCATCCTTACAAAAAATGAGAACATTAACAAGTCATATCCTCATGAAGAAGCTTCCTCTCAACACATAAACAACGCCTTTGATAAATTTCAACAACACAACAAAGAAAGTGTCATGTTGCAGTGCTTTATTTCAATTGCACCATTTGCAAGCATGCATGATGACATATGCTACATTTCAATGGACACAAAATCTCACATTGTTATCATGCCATTCCATAAGCGATGGTCCATCAATGGAGATGTTGAGGTTTCCAATGCTTCAATCAGGACAGTAAACCAGAAAGTTATGAGGAAAGCTCCTTGCTCAGTTGGAGTCTTAATTGATAGAAGCGAGATGAGTGGAGAACTATTAGTTGCTTATGAGAAATCACTATGTGAAATTGCCATTGTCTTCTTAGGTGGTGCCGATGACCAAGAGGCACTGGCTTTTGGTTTGCACATGGCTCAACATCCAAATGTTAGACTTACAGTGTTTTGGATAAGGGTTGAAATGCTAAAAAAACAAAGAAATATGAATGACCCTTATATTGAATTGATAGAGCATATAAAGTATAATCCTAACCTTACAGGGAAGGTGAACTTTAAGGAGGAGATTGTGGAAGACGGGATAGGAACAACACATATAATCCGAACAATGGAAGGACATTTTAATTTGGTTATAGTGGGTAGACACCATAGAGAAAACTTTGAATGTACACTAGGCTTGACAGAATGGTGTGAACTCCCAGAGCTTGGGCCAGTTGGGAACCTTTTAGCCTCAGATTTTACATTTTCAGTTTTGGTGGTGCAACAACAATCCTTCAATTTTGATTTTGGATGTATTAGGTGA 2358 0.3787 MANETDHEMINQLSFYGNIGIDQLVCQYIEKHGSRGIYLGDNPLHHPTTMLMTQIILIFTVGRIGHLLMKPCHQIQFISQIVAGIILGPLLLGRLHSGYELLFPLASRMTLSTFAEFGMIIYFFKIGVQINYKNFLKFEKQAMAIGLVGQLSSILLGTAVFIIVSSYLKTDLEGISGIVVFSSLTAFPTITSFLNEMNILNSEIGRMAISTSLVSDKCTWILFFFVVNNVKALQQRSFIPVVVLVGTICYFTTLFFLLRPLVIWISHRNPKGKPMTEGYFLAILFILLFLGLSAQVAGQPAFVIAFWFGLILPDGPPLGSVLAERIDTIGSTLIIPAYCTISGLSTIVPPLTSEAICIEAILLAGLVGKFGGTIIPSLHFKIDFWDSIALSLIMCCKGLIDLALYTLLFKNKDIGELPYTLLIYTLVGVTGFATIVIYYIYDPSKSYMNYTRKSIKDSQKDLEFKVLVCIYNEENVYPMINLLQASNTSKTTPLSVFILHLLELAGRAEPILTKNENINKSYPHEEASSQHINNAFDKFQQHNKESVMLQCFISIAPFASMHDDICYISMDTKSHIVIMPFHKRWSINGDVEVSNASIRTVNQKVMRKAPCSVGVLIDRSEMSGELLVAYEKSLCEIAIVFLGGADDQEALAFGLHMAQHPNVRLTVFWIRVEMLKKQRNMNDPYIELIEHIKYNPNLTGKVNFKEEIVEDGIGTTHIIRTMEGHFNLVIVGRHHRENFECTLGLTEWCELPELGPVGNLLASDFTFSVLVVQQQSFNFDFGCIR* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1024 785 Pfam Sodium/hydrogen exchanger family 55 435 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja6g1024 785 PANTHER CATION/H + ANTIPORTER 37 775 - -
Lja6g1024 785 PANTHER CATION/H(+) ANTIPORTER 14 37 775 - -
Lja6g1024 785 Gene3D - 48 446 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1024 Lja-Chr6 23724570 23727640 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1024 3 775 Antiporter Super Family AT1G06970 36.444 1.98e-166 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1024 - - gmx:100804488 1004.59