Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1023 ATGCCTGGTAAGGGATCCCGCCTGGAATGCTTCAATCCTATAGTTGACGCAGCTAGTGGACGTGACCTTATTCCAGCCATGGTTTATGGAAGGAATGTGCGGGGTCAGGAGTTTGGAGAAATGTATTGTGCATTACTAGTAGTCAATTCATCTGTGGTATCTGCGGCCATGCTTCGAATTTTCGGCTCAGATGTTGCTGAACTTCCTTTAGTTGCAACAAGTAACAGGAATCACGGGAAGGGCTACTTCCAAACACTCTTCTCCTGCAATGAGAGGCTTTTGGCTTTCATGAATGTGAAGAGCCTTGTACTGCCAGCTGCAGAAGAAGCAGAATCAATATGGACAGATAAATTTGGGTTTAGCAGGATGAAGCCAGACGAGGTATAA 387 0.4574 MPGKGSRLECFNPIVDAASGRDLIPAMVYGRNVRGQEFGEMYCALLVVNSSVVSAAMLRIFGSDVAELPLVATSNRNHGKGYFQTLFSCNERLLAFMNVKSLVLPAAEEAESIWTDKFGFSRMKPDEV* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1023 128 PANTHER AUTOIMMUNE REGULATOR 9 128 - -
Lja6g1023 128 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 9 128 - -
Lja6g1023 128 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 39 123 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1023 Lja-Chr6 23701110 23703338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1023 9 123 PHD Transcription Factor Family AT3G53680 71.304 4.17e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1023 - - gmx:100802562 220.705