Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1019 ATGGATGCTGCAGGTCGCATCCACAATGCACTGCAATCTGGTTCTGCGGCACTCATGCATTTCCGAGACAACTTCATTTGCCACGCGGTTAACAAAATCAACTCCAGAGGGTTCTGGTTGGGAGATGACCCACTTGCCTTCTCTGTCCCTCTCTTCTTGCTCCAGCTTTTCCTCATGTTCATCTTCACCCGCTTCATCTACTACATTCTCAAGCCCTTCGGTCAACCTTCTTTTGTTTCCCAGATTCTTGGTGGTGTAACTCTAGGTCCTTCTATTCTTGGGCACAGCTCAGCATTCGCCGACAAGGTTTTCCCACCAAGAGGAAGAAATTTGCTTGATACCATGGCATTTTTTGGGTTCATGTTGTTCATCTTCATACTTGGGGTAAAGATAGATCCAACCATCATTTTTAGATCAGGGAAAAGGACATTTACCATAGGAATTTTAGGCTTCTTCATTCCTTACACTCTTGCCGGAACGGCTGTCTTCATCCTCAACCATGTTGCTTCACTGGATGAAGATATCACTAATGTACTTCCTACTGTGGTGGCAATTCAATGTATCACAGCTTTCCCAGTAATTTCTTGCTTTCTTGCTGAACTTCAAATACTCAATTCGGAGATAGGGCGGTTAGCCTCCTCTTCTTCACTAGTGAGTGACATGTGCTTCTGTTTAGTCACGACAATGAAGTTTGCTACAAAATTATCCTCCACGAAGTCAATAGGAGTAACTATTGGATCTTTCATATCCACCATTCTTCTCATGTTGTTCATTGTGTTTGTGGTTCATCCAGCAGCATTATGGGCTATACAACACACGCCAGAGGGGAAACCTGTTCAGGAAATTTATATTTGTGGGGCTCTTATAGCACTGCTATTCTGTGCACTCATGGGTGAAGTCATTGGTTTGAATGCAATTGTTGTATCTTTCTTGGTGGGGCTTGCTATACCAGATGGGCCTCCTTTAGGAGCAGCATTGGTAGACAAGCTTGATTGTTTTGTTTCAGTAGTGCTCATTCCTATCCTTTTTGCTGTAGTTGGATTAAGGACAGATGTTTATGCCATTCAGAGGATGAAGAATTTGGGCATAATTCAGTTGATTATTTTCATTGCATTTTTTGGGAAAATTGTAGGGGCTTTATTGCCTCTCCTTTTCTGCAGGATGCCGTTTCGAGATGCGATTTCTCTTGGTCTCATAATGAACTGCAAAGGCACTGTTGAGCTGGCCTTGTTGATTGACATGAAGTTAAGAGATGCTTTGAATGATGAATGCTTTGCAATTCTGGTTCTTACTTTAGTGCTTGTGACTGGCATTGTGTCACCTATTGTGAAAGCTTTATATGATCCTTCCAGGAGGTTTCTTGCTTACAAAAGGAGGACAATTTTGCATCACCATAATGATGAAGAGCTGCGAATTCTAGCTTGCATCCATAAACAAGATAATGTGTTGGCTATTTTGAACCTCCTTGCTGCTTCCAATCCCACTGAAGCAAGCCCCATTGACTTGGTTGTGCTACATCTTGTTAAACTTGTAGGCCGAGCTTCCTCCTTGCTCGTTTCGCATGTGCCGCGTGAAAAGCTTAGCCAACGTCCTACTCAAAGTGAGATTATCTTCAACTCATTCAGCAAATTTGAACATGCCTACAGGGGAAAGGTAACACTGCATTGCTATAAAGGCATATCTCCATATGCTACAATGCACAATGATGTGTGCTACTTGGCACTTGAAAAGAGAACAACTTTCATCATCATACCTTTTCACAAGCAGTGGATAATTGGAGGGATGACCGAGTCATCTTTCGCCTACAAGCAACTCAACAAGAATGTTCTAGAGAAAGCTCCTTGCTCTGTAGGAGTCCTCATTGATCGCGGTAGTCAGAAAAAATTCTGGTGTGGCTACATGAATGAATCAATATACCAGGTTGCTGTGATCTTCTTCGGAGGCGTAGATGATCGAGAAGCGCTCGCGTATGCAAGAAGAATGTTGGATCAACCTAATGTACATATCACTCTCTTTTATTTTTCATCTCCAATAGAGATGGTTGGTGGCACAGAGAGGAGCAAAATGCTTGATACACAGATCTTGAGTGAGTTTAGGCTAAGTGCTTTCAGGAATGACAGAGTTTCTTACAAAGAAGAGTTGGTGACGAACGGAAGGAACGTGCTTTCGGTTATGGAACACATGGAGAGCTTCTATGACCTTGTTATGGTTGGGAGGAGACATGCAGATTCACAGTTGATGTCTGAACTTAGAAAATGGAAGCAAGGAGAGTTGGGAATTGTGGGAGAGATTCTTATCTCTTTGAATAATGGAGCCAAAACATCAATTTTGGTGGTACAACAACAAACCAAATTTTGGGGATCACGTGATCCAGAGGATTGCACAAACTTGAGAAGAGAATTATATAGCAACATTTAG 2418 0.4235 MDAAGRIHNALQSGSAALMHFRDNFICHAVNKINSRGFWLGDDPLAFSVPLFLLQLFLMFIFTRFIYYILKPFGQPSFVSQILGGVTLGPSILGHSSAFADKVFPPRGRNLLDTMAFFGFMLFIFILGVKIDPTIIFRSGKRTFTIGILGFFIPYTLAGTAVFILNHVASLDEDITNVLPTVVAIQCITAFPVISCFLAELQILNSEIGRLASSSSLVSDMCFCLVTTMKFATKLSSTKSIGVTIGSFISTILLMLFIVFVVHPAALWAIQHTPEGKPVQEIYICGALIALLFCALMGEVIGLNAIVVSFLVGLAIPDGPPLGAALVDKLDCFVSVVLIPILFAVVGLRTDVYAIQRMKNLGIIQLIIFIAFFGKIVGALLPLLFCRMPFRDAISLGLIMNCKGTVELALLIDMKLRDALNDECFAILVLTLVLVTGIVSPIVKALYDPSRRFLAYKRRTILHHHNDEELRILACIHKQDNVLAILNLLAASNPTEASPIDLVVLHLVKLVGRASSLLVSHVPREKLSQRPTQSEIIFNSFSKFEHAYRGKVTLHCYKGISPYATMHNDVCYLALEKRTTFIIIPFHKQWIIGGMTESSFAYKQLNKNVLEKAPCSVGVLIDRGSQKKFWCGYMNESIYQVAVIFFGGVDDREALAYARRMLDQPNVHITLFYFSSPIEMVGGTERSKMLDTQILSEFRLSAFRNDRVSYKEELVTNGRNVLSVMEHMESFYDLVMVGRRHADSQLMSELRKWKQGELGIVGEILISLNNGAKTSILVVQQQTKFWGSRDPEDCTNLRRELYSNI* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1019 805 PANTHER CATION/H + ANTIPORTER 19 787 - -
Lja6g1019 805 PANTHER OS08G0117800 PROTEIN 19 787 - -
Lja6g1019 805 Pfam Sodium/hydrogen exchanger family 60 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja6g1019 805 Gene3D - 51 453 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1019 Lja-Chr6 23443928 23447937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1019 24 793 Antiporter Super Family AT2G13620 40.302 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1019 - - gmx:102665255 1207.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1019 6 23443928 23447937 Lja6g1019 6 23443928 23447937 ECH